Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0739 ATGGGCTTTCTCCGGCGACTCTTCGGCGGCAAAAAGCACCACAACCCGGTAACCACAAACGGGTCGGATCCCAAACCGGGCAAAGATAAGAGAACATGGAGCTTCGTGAAACACACCACACGAGACAAGTCTCACGCATTACCCTCTGCTAACACCAACTTTGACCCCTCCACTTCTTCTGTTCCTTTCACCGACTCCTTGGACGCCAATAAGCATGCCATCGCCGTCGCCGCTGCCACCGCCGCCGTCGCCGAGGCTGCTCTCGCCGCCGCTCACGCCGCAGCCGAGGTCGTCAGGCTAACCAGCAGCACCGGTAGTGCCACCGCCAGGCCCCACACGGCGGCGCAACCCCGGCGATTGGCGGAGGAAACCGCCGCCGCCGTGAAGATTCAGTCGGCGTTCCGAGGTTACTTGGCAAGGAGGGCATTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGGGGTCACATTGTAAGAAAGCAAACTGCGGATATGCTGAGGCGCATGCAAACATTGGTGCGACTGCAGTCGAGGGCACGTGCAAGTCGTGTGATCCTGTCAGATAATAATATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGATTATGAGCACCCCTTTCGTGCCTATAGTACCAAATTTGATGGATCTTCTATACTCAAGAGATGTAGTTCCAATGCAAATTTTAGGGACATTGACTTGGAGAGAACCAGGTTTGGTTCCAATTGGTTTGAAGGTTGGATGGAAGAAAGTGCATGGAGCCAAACTAGAGAAGCTTCATTGAGAAATGGACAAACTGATGATGATAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACACACACCATAGTAGTAGCTCACATCATTATTTGTCTTGTGATTACAACAATGAGAGTTTTGTGGCGTATGAGTCTCCATCAAAACGTTCTTCAAGAGCTCTAAATCCAAGTCTCTCTTCAAGGGAGGTTTTACCGTTAGGTTCTCTCAAGTTCCACAAAGGAAAAGAAGCAGCAGCTTCAAGAACATCTGAGAATAGTCCTCAACCATTTTCTGCTTCTTCTAGGCTTGGAAGTGGTACAAGGAGAGGTCCGTTTACACCCACTAAGAGTGAGTGTTCATGGGGTTTCTTCAGTGGCTACACGGGTCATCCCAATTACATGGCAAATACTGAATCTTCCAGAGCTAAGGTTAGGTCACATAGTGCTCCAAGGCAAAGGGTGGAGTATGAGAGATATGGTGCCACTAGAAGGTCTCTTCAGGGTTTTTGGGATGCAGGGCCTAGTGCAGATAGGGATGCTGATTTTAGGAACAAGGCCTATTCAAGCACATGCAGCTTGGACAGAATTGAAAGTGCAAATTTAAGGTGA 1404 0.49 MGFLRRLFGGKKHHNPVTTNGSDPKPGKDKRTWSFVKHTTRDKSHALPSANTNFDPSTSSVPFTDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSTGSATARPHTAAQPRRLAEETAAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARASRVILSDNNMHSFKSSLSHYPVPEDYEHPFRAYSTKFDGSSILKRCSSNANFRDIDLERTRFGSNWFEGWMEESAWSQTREASLRNGQTDDDKSDKILEVDTWKPHLNTHHSSSSHHYLSCDYNNESFVAYESPSKRSSRALNPSLSSREVLPLGSLKFHKGKEAAASRTSENSPQPFSASSRLGSGTRRGPFTPTKSECSWGFFSGYTGHPNYMANTESSRAKVRSHSAPRQRVEYERYGATRRSLQGFWDAGPSADRDADFRNKAYSSTCSLDRIESANLR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0739 467 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Apr6g0739 467 PANTHER IQ-DOMAIN 5-RELATED 1 465 - -
Apr6g0739 467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 168 IPR027417 -
Apr6g0739 467 Pfam Protein of unknown function (DUF4005) 358 431 IPR025064 -
Apr6g0739 467 PANTHER CALMODULIN-BINDING PROTEIN 1 465 - -
Apr6g0739 467 MobiDBLite consensus disorder prediction 39 58 - -
Apr6g0739 467 MobiDBLite consensus disorder prediction 1 31 - -
Apr6g0739 467 SMART iq_5 145 166 IPR000048 GO:0005515
Apr6g0739 467 SMART iq_5 122 144 IPR000048 GO:0005515
Apr6g0739 467 MobiDBLite consensus disorder prediction 346 378 - -
Apr6g0739 467 Pfam IQ calmodulin-binding motif 124 144 IPR000048 GO:0005515
Apr6g0739 467 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Apr6g0739 467 MobiDBLite consensus disorder prediction 352 378 - -
Apr6g0739 467 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Apr6g0739 467 Gene3D - 121 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0739 Apr-Chr6 11570385 11575193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0739 1 433 IQD Protein Family AT5G62070 45.964 2.38e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0739 - - gmx:100785181 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0739 6 11570385 11575193 Apr6g0739 6 11570385 11575193 ECH