Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0737 ATGGAGGGCAATAGTGAGATGGGTCTTCTTGGAGAAAGTTTTGATACTAATTTTGTGGGGAGGATGAGGGATGATGAGTATGAAAGCCGGTCTGGGAGTGATAATTTCGATGGAGGATCTGGTGATGATCAAGATGCTGGTGATGATCAACCACAGAAGAAGAAGAAGAAGTACCATAGACACACCCCTCAACAAATTCAGGAGCTTGAAGCGTTCTTCAAGGAGTGTCCTCATCCAGATGAGAAGCAAAGATCAGATCTTAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTCAAATTCTGGTTTCAGAATCGACGAACCCAGATGAAGACGCAACTGGAACGCCATGAGAACATGATTCTTAGGCAGGAAAATGAGAGGCTCCGAGCTGAGAACAGTGTAAGGAAGGATGCTTTGGCAAATCCGATATGCAACAACTGTGGTGGACCAGCTGTTCCTGGCCAAATTTCATTGGAAGAACATCAGACTAGAATTGAAAATGCTCGGCTAAAGGAGGAATTGAACCGAATATGTGCCCTAGCAAACAAGTTCCTGGGCCGGCCCCTCTCATCACTGGCCAGTCCCATTCCTCTGCCAGCCTCAAATTCTGGTCTAGAGCTTGCTATTGGAAGAAATGGGATGAATGGTTCAGGCAATTTTGGCATGTCCTTGCCAATGGGACTTGACGTGGCAGATGGTGTTTTGGGCTCCTCACCTGCAATGTCTGGTATGAGTGTTAGATCACCAATGGGAATGATTGGAAATGAAGTCCAGATTGAGAGATCTATGCTTCTAGATCTTGCATTAACTGCTATGGATGAATTAATCAAGTTGGCTCAGCCAGATACCCCTCTTTGGATTAAGAGTCCTGATGGAAGGAATGAAGTATTGAACCATGAGGAGTATGCAAGAACATTTTCTCCTTATCATGGTCCCAAACCAACTGGTTATGTAACCGAAGCTACAAGAGAAACTGGTATAGTATTAGTCAACAGTTTAGCCCTTGTGGAAACATTGATGGACACGGATCGATGGTCAGAGATGTTTTCTTGTGTGGTTGCTAGTGCTGTCACCCTGGATGTAATATCTGGTGGTATGGGAGGAACCAGAAATGGTGCTTTGCAAGTGATGCTTGCTGAGGTTCAATTGCTTTCTCCACTAGTTCCTGTTCGTCAATTGAGTTTCCTCAGGTTTTGCAAACAGCATGCGGAAGGTGTATGGGTTGTTGTTGATGTTTCAGTTGACATTGGTCGTAATGCTACCAATGCACAGCCATTAATGAGCTGCAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTCTCTCCAAGATTACTTGGGTTGATCATTACCAATATGATGAGAGTGTTGTTCACCAACTTTATCGCCCATTAGTTAATTCTGGCATTGGCTTTGGTGCTCAAAGATGGATTAACACCCTCCTAAGGCAGTGTGAATGCTTTGCAATCCTCATGTCTCCAATCCCATCTGAGGACCCCACAGCCTTAAACCAATCCGGTAAGAGAAGCATGCTGAAGCTTTCACAACGCATGACTGATTATTTCTGCTCTGGGATTTGTGCTTCATCCACTCGCAAGTGGGATGTCCTTCATGTTGGTAATCTGAGTGATGACATGAGAATCATGGCCCGGAAGAATGTGGATGACCCGAGTGAGGCTGGCATTGTGCTGAGCGCTTCAACTTCTGTTTGGATGCCGGTCTCGCGGCAAAGGGTGTTTGACTTTCTGCGTGATGGACAGTTGAGAGGCGAGTGGGACATGCTGTCCAATGGGGGACCAATGCAGGAGATGCTCCATATTGCTAAGGGACAAGAACATGGAAATTGTGTTTCTATCCTCCGTGCTGCTAACAGCAACGAGAGCAACGTGCTATATCTGCAAGAGTCATGGAGTGATACCTCCGGTTCAATGGTGGTGTATTCCCCTATCAACATGCAATCCTTGAACATGGTGATGAGCTGCGAAGATTCATCTTTCGTCACTCTCCGTCCTTCGGGCTTTGTTGTTTTGCCAGATGGTCATTCAAACAATGGCGATGGCAGTGGTGGTAGTGACAGCGGCGGAAGCTTACTAACCGTTGGGTTACAAATGTTGCAGAATGGCCAGCATGCAGCTAAACTCACTGTGGAGTCCATTGAAACTGTTAATAACCTAATCACATGCACCATTCAGAAGATCAAAGATGCACTTGGAGTTGCATGA 2232 0.4592 MEGNSEMGLLGESFDTNFVGRMRDDEYESRSGSDNFDGGSGDDQDAGDDQPQKKKKKYHRHTPQQIQELEAFFKECPHPDEKQRSDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENMILRQENERLRAENSVRKDALANPICNNCGGPAVPGQISLEEHQTRIENARLKEELNRICALANKFLGRPLSSLASPIPLPASNSGLELAIGRNGMNGSGNFGMSLPMGLDVADGVLGSSPAMSGMSVRSPMGMIGNEVQIERSMLLDLALTAMDELIKLAQPDTPLWIKSPDGRNEVLNHEEYARTFSPYHGPKPTGYVTEATRETGIVLVNSLALVETLMDTDRWSEMFSCVVASAVTLDVISGGMGGTRNGALQVMLAEVQLLSPLVPVRQLSFLRFCKQHAEGVWVVVDVSVDIGRNATNAQPLMSCRRLPSGCIVQDMPNGLSKITWVDHYQYDESVVHQLYRPLVNSGIGFGAQRWINTLLRQCECFAILMSPIPSEDPTALNQSGKRSMLKLSQRMTDYFCSGICASSTRKWDVLHVGNLSDDMRIMARKNVDDPSEAGIVLSASTSVWMPVSRQRVFDFLRDGQLRGEWDMLSNGGPMQEMLHIAKGQEHGNCVSILRAANSNESNVLYLQESWSDTSGSMVVYSPINMQSLNMVMSCEDSSFVTLRPSGFVVLPDGHSNNGDGSGGSDSGGSLLTVGLQMLQNGQHAAKLTVESIETVNNLITCTIQKIKDALGVA* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0737 743 MobiDBLite consensus disorder prediction 1 62 - -
Apr6g0737 743 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 741 IPR042160 -
Apr6g0737 743 CDD START_ArGLABRA2_like 261 489 - -
Apr6g0737 743 SUPERFAMILY Bet v1-like 259 491 - -
Apr6g0737 743 SMART START_1 266 490 IPR002913 GO:0008289
Apr6g0737 743 SMART HOX_1 54 116 IPR001356 GO:0003677
Apr6g0737 743 Coils Coil 106 133 - -
Apr6g0737 743 CDD homeodomain 59 112 IPR001356 GO:0003677
Apr6g0737 743 SUPERFAMILY Homeodomain-like 35 112 IPR009057 -
Apr6g0737 743 ProSiteProfiles START domain profile. 257 493 IPR002913 GO:0008289
Apr6g0737 743 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Apr6g0737 743 Pfam Homeodomain 55 110 IPR001356 GO:0003677
Apr6g0737 743 SUPERFAMILY Bet v1-like 509 708 - -
Apr6g0737 743 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Apr6g0737 743 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 5 741 - -
Apr6g0737 743 MobiDBLite consensus disorder prediction 18 32 - -
Apr6g0737 743 Pfam START domain 267 490 IPR002913 GO:0008289
Apr6g0737 743 Gene3D - 42 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0737 Apr-Chr6 11502973 11509171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0737 1 740 Homeobox Transcription Factor Family AT3G61150 54.987 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Apr6g0737 START 5.8e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0737 K09338 - gmx:100820113 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1778 7 25129929 25136114 Apr6g0737 6 11502973 11509171 ECH
Apr6g0737 6 11502973 11509171 Apr6g0737 6 11502973 11509171 ECH