Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0729 ATGGTTATTTTCATTCTGATACTTCTAAGTATTTTCTTCAATCTTTTAACGAAATGGAGCAAACCCAATTCTTCAAAATCCATAAAAAACTCACCACCATCTCCTCCAAAGCTTCCAATATTAGGAAACCTCCATCAACTTGGCCCACTCAAACACCGCACTCTCCAATCCTTTGCTCAAACCTATGGTCCCATGATGTTGCTGCATTTTGGTAAGGTGCCAGTGTTTGTGGTTTCAAATTCTGAGGCGGCATGTGAGGTTATGAAAACCCATGACCTTGCTTTCTGCAGTAGGCCACATCGTAAAATGTTTGATATTTTCTTTTATGGTTCTTCCGATGTGGGATGTACTCCTTATGGCGAATATTGGAGGCAAAAGAGGAGTATTTGCGTCAAGCATATTTTGAGTATGAAAAAAGTTCAATCTTTTAGTGCAGTGCGAGAGGAGGAAATTGCCACAATGACGGGAAAAATTAGGCAAGTGGCTCTTGGAAGGAGATATAGTGGAGAGGGTGGGAGTAAGCTGAGGGAGCCTATGAATGAGATGGTGGAGTTATTGGGTGTTTCAGTTTTGGGGGATTATATACCTTGGCTTGATTGGTTGGGAAGAGTTAATGGGGTATATGGAAGAGCAGAGAGAGTTGCTAAACAATTTGATGAATTTTTTGAAGAAGTTATTGATGAGCATGTTAGTAAGAGAGACAATGATGTTGATGGTGAAGGCCAGAATGATTTTATGGACATTTTGCTGGGGATCCAAAAGACAAACCCCATAGGCTTCCAGATTGATAGAACAACCATAAAGGCTTTGACGATGGATATGTTTACTGCAGGTACTGAAACTACCTTCTCATTCCTAGAGTGGGCAATGACAGAACTGTTAAGACACCCAAATGTGATGCACAAATTGCAAGATGAGGTGAGGAATATGGTGGGTGATAAAGCACAAGTAACTGAGGAGGATTTGAGTAACATGCATTACTTGAAGGCAGTGATTAAAGAAGCTTTTCGCTTACACCCTCCAGTTCCCTTGTTACTTCCAAGGGAATCCGTGCAAGATATCAACGTGATGGGTTATGAGATTGCATCTGGCACACACAAATTTGTTAATGCTTGGGCAATTGCAAGAGACCCTTCATGTTGGGACCAACCACTAGAATTTCAACCAGAGAGATTCTTGAACAGTTCAATAGATGTGAAAGGACATGATTTCCAATTGATCCCATTTGGGGCAGGAAGAAGGGGTTGCCCAGGCATAACCTTTTCCACGGTTCTGAATGAACTTGTCATGGCAAACCTTGTTCACCAATTTGATTGGACTGTGCCTCATGGAGTAGTGGGGGATCAAACATTGGACATTTCTGAATCTACTGGGATGGCCGTTCACAAAAAATTTCCTCTAGTGGCAATTGCATCCCCACGTATATATAAGAAGTGA 1437 0.4161 MVIFILILLSIFFNLLTKWSKPNSSKSIKNSPPSPPKLPILGNLHQLGPLKHRTLQSFAQTYGPMMLLHFGKVPVFVVSNSEAACEVMKTHDLAFCSRPHRKMFDIFFYGSSDVGCTPYGEYWRQKRSICVKHILSMKKVQSFSAVREEEIATMTGKIRQVALGRRYSGEGGSKLREPMNEMVELLGVSVLGDYIPWLDWLGRVNGVYGRAERVAKQFDEFFEEVIDEHVSKRDNDVDGEGQNDFMDILLGIQKTNPIGFQIDRTTIKALTMDMFTAGTETTFSFLEWAMTELLRHPNVMHKLQDEVRNMVGDKAQVTEEDLSNMHYLKAVIKEAFRLHPPVPLLLPRESVQDINVMGYEIASGTHKFVNAWAIARDPSCWDQPLEFQPERFLNSSIDVKGHDFQLIPFGAGRRGCPGITFSTVLNELVMANLVHQFDWTVPHGVVGDQTLDISESTGMAVHKKFPLVAIASPRIYKK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0729 478 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 SUPERFAMILY Cytochrome P450 32 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Apr6g0729 478 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 Gene3D Cytochrome P450 18 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 Pfam Cytochrome P450 32 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 Pfam Cytochrome P450 158 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0729 478 PANTHER CYTOCHROME P450 71B11-RELATED 160 472 - -
Apr6g0729 478 PANTHER CYTOCHROME P450 71B11-RELATED 6 160 - -
Apr6g0729 478 PANTHER CYTOCHROME P450 FAMILY PROTEIN 160 472 - -
Apr6g0729 478 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 160 - -
Apr6g0729 478 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0729 Apr-Chr6 11332306 11336133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0729 1 472 Cytochrome P450 AT3G48270 48.081 2.63e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0729 - - gmx:100806940 674.47