Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0699 ATGGAAACCCCAATGACACTCACCGGCTTGCTCCGCCGCGTTGCCGGAAAATTCCCCTCCCTCCGAGCCATCTCCGTCGCCGGAAAATTCGACATCACCCACTCCCGCCTCCACCAACTGGCCGAATCTGCCGCCGCTCGCTTGGTCTCCGCCGGAATCAAGCCCGGCGATGTCGTCGCCCTCACCTTCCCTAACACCGTCGAGTTCGTTGTTATGTTCTTAGCCGTTATTCGAGCTCGAGCCACAGCGGCGCCGTTAAACCCGGCTTACACAGCCGATGAGTTCGAGTTTTACTTATCCGACTCGGAATCGAAGCTTCTGTTGACATCGTTGGAAGGAAACGAGCCGGCTCAGTCCGCGGCTTCCAAGCTCAACATCCCCCGCGCCGCGGCTTCAATTAGTCAAGCCGAAAACGAACAAGCCGAGCTGAGTCTCTCGTTGAACCACCTCGACTCGATTGACTCGGTTTCCGAACTCGTTAATGAGCCTGATGACGTGGCGCTTTTTCTCCACACCTCGGGCACAACGAGCCGTCCCAAGGGAGTGCCACTGACTCAGCACAACTTGTTATCATCGGTGAGGAACATCGAGTCAGTGTACCGACTCACTGAGTCTGACTCGACGGTGATTGTGCTTCCTTTGTTTCACGTTCACGGGTTGATCGCCGGGTTACTGAGTTCACTCGGCGCCGGCGCGGCGGTGGCGTTGCCGGCGGCGGGAAGGTTCTCTGCGTCGACGTTTTGGAAGGACATGGTTAAGTACAACGCCACGTGGTACACTGCGGTTCCTACCATACACCAGATCATACTGGATCGCCACTCGAATAACCCCGAACCGGTTTACCCGAGGCTCCGGTTTATTAGGAGCTGTAGTGCTTCGCTTGCACCGGTTATTTTAGGTAAACTGGAAGAGGCTTTCGGAGCACCGGTTTTGGAGGCTTATGCGATGACTGAGGCCTCTCATCTTATGGCTTCGAACCCGTTGCCACAAGATGGGCCCCACAAGGCCGGGTCAGTTGGGAAACCCGTGGGTCAAGAAATGGCTATATTGAATGAAACGGGTCGGGTCCAAGAAGCTGAGGTTAGTGGAGAGGTTTGTATTCGGGGACCCAACGTGACAAAAGGATATAAGAACAACGTGGATGCTAATACGGCGGCGTTTCAGTTTGGTTGGTTTCACACTGGTGATATTGGATACTTTGATTCGGAGGGGTACTTGCATCTCGTGGGTCGGATCAAGGAACTCATTAACCGAGGAGGGGAAAAAATATCACCAATAGAAGTGGATGGTGTCCTTCTATCACATCCAGACATTGCTCAGGCTGTTGCTTTCGGAGTGCCCGATGAGAAGTATGGCGAAGAGATATACTGTGCTGTGATCCCAAGAGAAGGATCAAACATTGATGAGGTAGAGGTTCTAAGATATAGCAAGAAGAATCTTGCATCTTTCAAGGTCCCCAAAAAGGTCTTCGTTACTGATTCTTTGCCCAAGACCGCCACTGGAAAGATTTTGCGCCGTCTTGTAGCAGAACACTTTGTCTCTCATATTTGA 1551 0.528 METPMTLTGLLRRVAGKFPSLRAISVAGKFDITHSRLHQLAESAAARLVSAGIKPGDVVALTFPNTVEFVVMFLAVIRARATAAPLNPAYTADEFEFYLSDSESKLLLTSLEGNEPAQSAASKLNIPRAAASISQAENEQAELSLSLNHLDSIDSVSELVNEPDDVALFLHTSGTTSRPKGVPLTQHNLLSSVRNIESVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASTFWKDMVKYNATWYTAVPTIHQIILDRHSNNPEPVYPRLRFIRSCSASLAPVILGKLEEAFGAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMAILNETGRVQEAEVSGEVCIRGPNVTKGYKNNVDANTAAFQFGWFHTGDIGYFDSEGYLHLVGRIKELINRGGEKISPIEVDGVLLSHPDIAQAVAFGVPDEKYGEEIYCAVIPREGSNIDEVEVLRYSKKNLASFKVPKKVFVTDSLPKTATGKILRRLVAEHFVSHI* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0699 516 Pfam AMP-binding enzyme 12 418 IPR000873 -
Apr6g0699 516 Gene3D - 412 514 IPR045851 -
Apr6g0699 516 CDD FACL_fum10p_like 19 510 IPR045310 GO:0016874
Apr6g0699 516 Gene3D - 6 411 IPR042099 -
Apr6g0699 516 Pfam AMP-binding enzyme C-terminal domain 427 502 IPR025110 -
Apr6g0699 516 PANTHER OXALATE--COA LIGASE-LIKE 1 515 - -
Apr6g0699 516 ProSitePatterns Putative AMP-binding domain signature. 169 180 IPR020845 -
Apr6g0699 516 PANTHER ACYL-COA SYNTHETASE 1 515 - -
Apr6g0699 516 SUPERFAMILY Acetyl-CoA synthetase-like 3 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0699 Apr-Chr6 10754381 10758271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0699 6 516 Monolignol Biosynthesis Gene Families AT4G05160 31.638 8.58e-61 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0699 K22133 - gmx:100779306 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0699 6 10754381 10758271 Apr6g0699 6 10754381 10758271 ECH