Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0697 ATGGAGATGTTATTGTTACCTGGAGCACTTGTTTTCTTTGCTATATTAGCTCTCTTATTCCTCTTGAAACTAATGTTTTCTTGGTGGGTTTCACCTCTCCGGAAACATCTTAAGCTTAAAAGATGTGGATTTGGAGGGCCACCCCCAAGTTTTCCACTTGGAAACATTCAAGAGATTAAAAAGAAGAATAGCGTTAGTTCTTCACAACATCGGTCCTCAAAGCCTACCCACGATATACACTCCACTGTGTTCCCCTATTTTTCTCGGTGGCAAATTTCTCACGGGAAGGTTTTCATCTATTGGCTGGGCACAGAACCCTTTTTGTACATTGCAGACCCAGAATTCTTGAAGAAAATGTCCACAGAGGTGATGGCTAAGAGATGGGGAAAACCGCGAGTGTTTAGAAACGACAGAGACCCTATGTTTGGAAATGGTTTGGTGATGGTTGAAGGCAATGAATGGGTTCGTCATAGGCATGTTATAGCCCCAGCATTTTCTCCAATTAACTTGAAGGCAATGGCAAGCATGATGGCTGAGTCTACAAATCAAATGATAGATAGGTGGATTACACAAATTAACTCCGGCAACCCAGAAATTAATGTGGAGAAAGAGGTTGTAGCAACGGCAGGAGAAATCATAGCAAGAACAAGCTTTGGCATGAAGGGTGAAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGACACTTTTTAAGACAACAAGATATGTAGGGGTTCCATTTGGCAAGTGTTTCAACGTGAAAAAAACCCTAGAGGCAAAGAAACTTGGGAAAGAGATTGATAAGCTCTTGTTATCCGTAATTACAGCTCGTACAACATCAATCAAAAGACAAACTCAAGAAGATTTACTGGGATTGTTGTTGCAAGGAAACCATCAAGTTGAAGAAAAATCAGGGAAAACACTCACTACTAGAGAATTATTGGATGAATGCAAGACCTTCTTCTTTGCTGGCCATGAGACTACGGCTTTGGCTATTTCATGGACTTTGTTCCTTCTAGCTATGCATGAAGATTGGCAAATCCAGTTAAGAAATGAAATTAGAGAAGTGGTCGGTGATAAAGAACTTGATAACAACGTGCTTGCTGGGCTGAGAAAGATGAAGTGGGTGATGAATGAAGTTCTGAGACTCTACCCAACGGCACCAAATGTGCAAAGGCAAGCTAGAGAAGACATTCAAGTTGATAATTTAACAGTACCTAATGGGACCAACATGTGGATCGATGTTGTGGCGATGCACCATGACACGACATTGTGGGGAGAAGATGCTAACGAGTTTAAGCCAGAGAGGTTCATGAATGATGTCAATGGTGGATGTGACCACAAGATGGGGTACTTGCCATTTGGATTTGGGGGTAGGATGTGTGTTGGTAGGAACTTGAGCTTTATGGAGTATAAGATAGTCTTAACCTTACTCCTCTCTAGATTTAGTTTTAAACTTTCCCCAGGTTATAACCATTCACCTTCTATCATGCTCTCCCTTAGACCCACTTATGGACTTCCTCTCATAGTTCACCCCCTTTAA 1551 0.4152 MEMLLLPGALVFFAILALLFLLKLMFSWWVSPLRKHLKLKRCGFGGPPPSFPLGNIQEIKKKNSVSSSQHRSSKPTHDIHSTVFPYFSRWQISHGKVFIYWLGTEPFLYIADPEFLKKMSTEVMAKRWGKPRVFRNDRDPMFGNGLVMVEGNEWVRHRHVIAPAFSPINLKAMASMMAESTNQMIDRWITQINSGNPEINVEKEVVATAGEIIARTSFGMKGENAKEVSEKLRALQMTLFKTTRYVGVPFGKCFNVKKTLEAKKLGKEIDKLLLSVITARTTSIKRQTQEDLLGLLLQGNHQVEEKSGKTLTTRELLDECKTFFFAGHETTALAISWTLFLLAMHEDWQIQLRNEIREVVGDKELDNNVLAGLRKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLTVPNGTNMWIDVVAMHHDTTLWGEDANEFKPERFMNDVNGGCDHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKLSPGYNHSPSIMLSLRPTYGLPLIVHPL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0697 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 Pfam Cytochrome P450 84 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 511 - -
Apr6g0697 516 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Apr6g0697 516 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 11 511 - -
Apr6g0697 516 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g0697 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0697 Apr-Chr6 10650929 10654990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0697 11 516 Cytochrome P450 AT5G52400 59.687 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0697 - - gmx:100784128 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0697 6 10650929 10654990 Apr6g0697 6 10650929 10654990 ECH
Apr6g0697 6 10650929 10654990 Apr8g2184 8 32373952 32376487 PCT
Apr8g2185 8 32382975 32385966 Apr6g0697 6 10650929 10654990 PCT