Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0695 ATGTCAGAATCCAAGGAAGAAAATTGTGACCTTCCTCACAAGTCAAAGACACAGGAGGAACATGGCTTTGCCATGGATTTTGATATTGACTTGGAAAGTTCATGGCCTTTGGATCATATATCTTTGGTCTCTAATCCCATGTCTCCTTTTTTCTTATCCACTATTTCTGAACAACCTTTTTCTCCTGTCTGGGCTTTTTCTGATGTTGAGGAAGATAGGTATGTCAAGATTTCAGGTAATACAAATACAGTAACTGAAAATCCAGCAGAAAATGCTGACACCAAAAAAACTGTGTCATCCCTTGCAGAAATGCCACCTTTAGAAAACCCAGATGGTTATTGTCTAATAAAGGAAAGAATGACACAAGCACTTCGCCACTTCAAAGAGTTGACTGAACAGAATGTTCTTGTTCAGGTTTGGGCACCTGTGAGGAATGGAAACCGGTATGCACTTACAACTTCAGGTCAACCATTTGTTCTTGATCCTTATAGTAATGGACTCAACCAATATAGAACAGTTTCCCTCATGTATATGTTCTCTGTGGATGGGGAGAATGATGAAATCTTGGGACTTCCTGGTCGAGTTTTTCAGCAGAAAATACCAGAATGGACTCCTAATGTTCAGTATTATTCTAGTAAAGAGTATCAGAGGCTAAACCATGCTCAACATTACAATGTTCGTGGAACCTTGGCTCTCCCAGTGTTTGAACCTCCAGGACAGTCATGTGTTGCTGTACTGGAGTTGATAATGACTTCACCAAAGATTAACTATGCTCCTGAGGTTGATAAAATCTGCAAAGCCCTTGAGGCAGTTAATTTGAGGAGTTCAGAAATTTTGGAGCATCCATACAATAAGATTTGTAATGAAGACCGCCAGATGGCATTAGCAGAGATTTTGGAGATATTGACAATTGTGTGTGAAACTCATAATTTACCTCTTGCACAAACATGGGTTCCATGTAGGCATAGGAGTGTTTTGGCACATGGTGGTGGTCTTAAGAAGAATTGCTCTAGTTTTGACGGTTGTTGCATGGGGCAAGTTTGCATGTCCATAACTGAAGCAGCATTCTATGTCATAGATGCTCATACATGGGGTTTCCATGAGGCTTGTGTTGAGCATCACTTACAACAAGGTCAAGGGGTTGCTGGGAGAGCATTTTTGTCACAGAACATGAGCTTCTGTGGAAACATAACTCAATTCTGCAAAACTGAGTATCCTTTAGTACATTATGCCCTCATGTTTGGGTTAACCAGCTGTTTTGCTATCTGTTTACAAAACTCTCATACTGGAAATGATGATTATGTTTTAGAGTTTTTCCTGCCTTCTAGGATCACAGACTTTAATGAACAAAAAAATTTGTTGGGATCCATATTGGCAACAATGAAGCCACATTTCCAGAGTCTTAAGATTGCTGCTGGAGTTGAACTTGAGGAGGAAGGTTCAATTGAAATTATAGAAGCAATAAATAAAAGAGTTTTTTTAAGGCTTGAATCAATTCCAATTACTCACTCTTCTAAGTCACCACCTAGACTTGATGTCTCACCAAATATGAGGGAAATGGTGCCACTACATCCATCAGAACAGCAAATAGGGACATTCTTGGATGACATAAATGATGGCGGGAGTTTTGGTGATAGTACAGGTGGATGCATCAAGCAGAACGCTTCCTTAGGTTCCAATACGACAAAGAAGCCCTCAGAGAGAAAACGTGGAAAAGCTGAGAAATCAATAAGTCTTGATGTTTTGCAACATTATTTCTCTGGGAGTCTTAAGGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACTACAATGAAGCGCATCTGTAGGCAGCACGGGATATCCCGTTGGCCATCTCGGAAGATAAAAAAGGTTAACCGTTCCCTATCCAAGCTCAAGTGTGTTATTGAATCAGTCCATGGAGCTGAAGGAGCATTTGATTTGAATTCTCTAAGTACAAGTTCATTTCCCATTGCTTCTGTTTCCTTCACTGAGCCTTCCACTTCAAACAAGTTCAACTACCAAGCCTCATTAAGCATTAGACCATCAGAAGCTAAGATGAATGAAAATGATTTGGATGCTTCCAAAGTGTCAGAAACAAACAAACAGGCTGGGACGGAAGATCAATTGGTAGGAGCAAGGACACAAAGTTTTGAGAAAGTGATTAATGATAAAGGTGGTTCCACTCAGGAGGTTGGCACTAAAGGCACAAACGAGTTTGGAGTTAGGAGTGGCTCAAGCGAAAGCAGTGCAAATCCTACTTCTCATGGTTCATGCCATGGTAGTCCCCCAAATGAAACTTCACCTGCAAAAGATACATTTACAACAGGCAACAGTGAGCAATATCTTGTGTTAAGGGGATCACTAGAGTCAACACTGTACTCTACTAGTACACAAAACTTTGCAACTGCATACCCTATGCCTAACGTTGTGGAAACAGAACTACAAGAACCATTTGGAGGGAAGCTACTTGAGGGTGCTGGTAGTTCTAAAGACTTGAGAAATCTCTGTCCTTCAGCAGATGCAATTTTGGAGGATCAAGTTCCAGAAGCTTGCAGGATTAATCCTCAATGTTCTGATTTGGCTCCTATACAACACATGGATAATCTTAATGACCCTATGACTCATTTTGCAGCTAGGAAAGAGATGAAGAGTGTAACTATTAAGGCAACATATAAAGAGGATATAATAAGATTTAAGGTCTCTTTGAACTGTGGCATTGAGGAATTGAAAGCAGAAATTGCCAAGAGATTGAAACTAGAGATGGGCACATTTGATATCAAGTATCTGGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAAGAGTGCATGGATATTTCAGGATCATCAGGAAGCAACATAATCAGGCTTGTTGTGCATGATATACTGTCCATTCTTGGAAGCTCTTGTGAGAGCTCAGGGGATTAG 2940 0.4054 MSESKEENCDLPHKSKTQEEHGFAMDFDIDLESSWPLDHISLVSNPMSPFFLSTISEQPFSPVWAFSDVEEDRYVKISGNTNTVTENPAENADTKKTVSSLAEMPPLENPDGYCLIKERMTQALRHFKELTEQNVLVQVWAPVRNGNRYALTTSGQPFVLDPYSNGLNQYRTVSLMYMFSVDGENDEILGLPGRVFQQKIPEWTPNVQYYSSKEYQRLNHAQHYNVRGTLALPVFEPPGQSCVAVLELIMTSPKINYAPEVDKICKALEAVNLRSSEILEHPYNKICNEDRQMALAEILEILTIVCETHNLPLAQTWVPCRHRSVLAHGGGLKKNCSSFDGCCMGQVCMSITEAAFYVIDAHTWGFHEACVEHHLQQGQGVAGRAFLSQNMSFCGNITQFCKTEYPLVHYALMFGLTSCFAICLQNSHTGNDDYVLEFFLPSRITDFNEQKNLLGSILATMKPHFQSLKIAAGVELEEEGSIEIIEAINKRVFLRLESIPITHSSKSPPRLDVSPNMREMVPLHPSEQQIGTFLDDINDGGSFGDSTGGCIKQNASLGSNTTKKPSERKRGKAEKSISLDVLQHYFSGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKIKKVNRSLSKLKCVIESVHGAEGAFDLNSLSTSSFPIASVSFTEPSTSNKFNYQASLSIRPSEAKMNENDLDASKVSETNKQAGTEDQLVGARTQSFEKVINDKGGSTQEVGTKGTNEFGVRSGSSESSANPTSHGSCHGSPPNETSPAKDTFTTGNSEQYLVLRGSLESTLYSTSTQNFATAYPMPNVVETELQEPFGGKLLEGAGSSKDLRNLCPSADAILEDQVPEACRINPQCSDLAPIQHMDNLNDPMTHFAARKEMKSVTIKATYKEDIIRFKVSLNCGIEELKAEIAKRLKLEMGTFDIKYLDDDHEWVLIACDADLQECMDISGSSGSNIIRLVVHDILSILGSSCESSGD* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0695 979 SMART PB1_new 884 966 IPR000270 GO:0005515
Apr6g0695 979 Pfam PB1 domain 885 965 IPR000270 GO:0005515
Apr6g0695 979 PANTHER PROTEIN NLP8 3 978 IPR045012 GO:0003700
Apr6g0695 979 ProSiteProfiles PB1 domain profile. 884 966 IPR000270 GO:0005515
Apr6g0695 979 MobiDBLite consensus disorder prediction 554 574 - -
Apr6g0695 979 ProSiteProfiles RWP-RK domain profile. 563 644 IPR003035 -
Apr6g0695 979 SUPERFAMILY CAD & PB1 domains 881 969 - -
Apr6g0695 979 CDD PB1_NLP 885 965 IPR034891 -
Apr6g0695 979 Gene3D - 880 965 - -
Apr6g0695 979 MobiDBLite consensus disorder prediction 696 712 - -
Apr6g0695 979 Pfam RWP-RK domain 577 624 IPR003035 -
Apr6g0695 979 MobiDBLite consensus disorder prediction 695 774 - -
Apr6g0695 979 MobiDBLite consensus disorder prediction 720 774 - -
Apr6g0695 979 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 3 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0695 Apr-Chr6 10576404 10582556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0695 250 979 NLP Transcription Factor Family AT4G24020 52.233 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Apr6g0695 PB1 1.2e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0695 - - gmx:100780901 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0695 6 10576404 10582556 Apr8g2180 8 32311602 32316524 PCT