Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0692 ATGGCACCAAAACAGCCAAGTACGGGTCTTTTTGTTGGATTGAATAAGGGTCACGTTGTTACCAAGAAGGATCTTCCTCCTCGCCCCTCCGATCGCAAAGGGAAAACAAGCAAACGGGTGCACTTTGTGAGGAACCTCATCCGTGAGGTTGCAGGTTTTGCACCATATGAAAAGCGTATAACTGAGTTGCTCAAGGTTGGGAAAGATAAGAGGGCACTGAAAGTTGCCAAGAGAAAGCTTGGAACCCATAAACGTGCAAAGAAGAAGAGAGAGGAGATGTCTAACGTTCTCAGAAAGATGAGGTTGGCTGGTGGAGCCGGTGATAAGAAGAAGTAG 336 0.4702 MAPKQPSTGLFVGLNKGHVVTKKDLPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRLAGGAGDKKK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0692 111 MobiDBLite consensus disorder prediction 87 111 - -
Apr6g0692 111 Coils Coil 83 103 - -
Apr6g0692 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Apr6g0692 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Apr6g0692 111 MobiDBLite consensus disorder prediction 1 37 - -
Apr6g0692 111 Gene3D 60S ribosomal protein L36 1 106 IPR038097 -
Apr6g0692 111 MobiDBLite consensus disorder prediction 79 111 - -
Apr6g0692 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Apr6g0692 111 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0692 Apr-Chr6 10544068 10545225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0692 7 111 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 83.019 7.64e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0692 K02920 - gmx:100526979 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0692 6 10544068 10545225 Apr6g0692 6 10544068 10545225 ECH