Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0691 ATGGCTCCGAAACAGCCAAGTACGGGTCTTTTTGTTGGATTGAATAAGGGTCACGTTGTTACCAAGAAGGATCTTCCTCCTCGCCCCTCCGATCGCAAAGGGAAAACAAGCAAGCGGGTGCACTTTGTGAGGAACCTCATTCGCGAGGTTGCTGGTTTTGCACCATATGAAAAGCGTATAACTGAGTTGCTCAAGGTTGGGAAAGATAAGAGGGCACTGAAAGTTGCCAAGAGAAAGCTTGGAACCCATAAACGTGCAAAGAAGAAGAGAGAGGAAATGTCAAACGTTCTCAGAAAGATGAGGGCTGGTGGAGCTGGTGATAAGAAGAATGTCTGCAATCCATAG 345 0.4696 MAPKQPSTGLFVGLNKGHVVTKKDLPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKNVCNP* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0691 114 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 109 - -
Apr6g0691 114 MobiDBLite consensus disorder prediction 87 105 - -
Apr6g0691 114 Gene3D 60S ribosomal protein L36 1 107 IPR038097 -
Apr6g0691 114 MobiDBLite consensus disorder prediction 79 114 - -
Apr6g0691 114 MobiDBLite consensus disorder prediction 1 37 - -
Apr6g0691 114 PANTHER 60S RIBOSOMAL PROTEIN L36 1 109 IPR000509 GO:0003735|GO:0005840|GO:0006412
Apr6g0691 114 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Apr6g0691 114 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0691 Apr-Chr6 10542331 10543837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0691 7 106 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 86.000 3.01e-58 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0691 K02920 - gmx:100526979 215.312