Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0688 ATGGTTTCGAACCAATTTGACCGCGCAGGGTCCAACCCGGGTCGCAAGGTTCGGGTCGTCGCCAAGATCCGTGGGTTTTCGGGTTCAGAGGCCAATTCAGAACCTAGCGCTTCGAGAGCTGTGGAATGGATTTCGGTGAACCGCGAAAATTCGGAGGATGTCGTCACAATCTCCTTCGGAAATCAATCTTCTAGTCGCTATTTGGTGGACTATTTCTATAAGGAACATGAAGATAATGAAATGATATTTTCAAGGGAGGTGAAGCCGCTTGTGTCAGCGGCTTTTGAAGGTCATAACAGCACTGTTATTGCTCATGGTGCAAGAGGCAGTGGAAAGACCTGTGTAATTCAGGGCTCTGCTGAGAGACCGGGATTGGCAATGCTTGCTATAGCTGAGTTTCTTTCAATGGCTGAGAAAAATCGGAAATCCATTTCTGTTTCTTTCTATGAGGTTGATCATCAGGAGCATGCTGTTGATTTATTAAATCCAGAACAACCACCAATTTTGGTTTTTGAAGATCGTGGCAGAATTCAGTTTAAAGGACTTACTCAGATTCCAGTGAAATCCACCACTGACTTCCAGAATTTGTACCTCGCTGCAAGTTCTGCACAGAAGGGAGCTCCCAAAAAAGGAGGCTGTGAACGTTTTCGTAGAAGCCACATGGGATTAATTGTGCATGTCTTCACCCAAAATGAAAACGTAGAATGTCTTCTGAGCAAAATGAATTTTGTTGATTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGTGGCGATGGCTCTTACCTTGCTGAGATTAACAAAATTAACAAGTCAATTTATGCCTTACTGAATGTTTGTCATGCTCTGACTACAAATGAATGTCGTGTTCCCTACCGGGAAAGCAAACTTACACGCATGCTACAGGATTCCCTGAGGGGGACTAGCAAAATTTTGTTGGTTTCTTGCTTGAACCCATCATTTTGCCAAGACAGTATTTACATGGTAAGCTTAGCATCACGATCATGTCAAGTTCATCGGATATCCTTTGATTCCACAAAGAAAATTGGAAGTTCAGCAAGGCAGATGCTGAATTCTCATAAGAACCAGATACCCAAAAGTGTTTCAGGAACAGCAAAGAAATTACATGGTTCTAAATTACTTGAAAAAAAATCTGGTGTTGCTATGAAGTCTGCAAGGAAAGGAAGGAAATTGTTTGATGAAGCCAGCCATTCTGCTGCTAAAGCTGAGAAGGACAATTCATTATCAGAAGCAGGAAATCATGTTGAACTCAACTCCGAAGGGGAAAAGGAGAATTCATTTCCAGCTTCTAGTCATGATGTGAAACTCAATCTGACGGTGGACAATGATGACTCATCTCTGAATGCTAGCACTGCAGTGGAACTCAATTTTTCCCTAGTGGAAAAGGGTATTTCTGTTGATAGAGAAGATCATCAAGAGCAACATACCCCTTTTGCCAGTAATTACTCGGAATCTGAAGCATTGTCAATAGCAGTTCAGGAAGACCATAACATGAACAAGGAGAACAACAGTTCAAGGGCAAATGAAGATGGTTCACCACCCATTAGTTCTCAACTGCGTGATCTTTCTAATAGTCTTAAATTGCTATATTCGTCAACTCCATTGTGCGTACAGATACCAGAAACGGAATCCATTTCACTGGATAATCAGATGTCTGCTGATATTGTGGAACCAAAAACTCCTGTAATTGAACAGAACATGAGTGTCAATAATAAATGGGATGTAATGAATGCCCAAAGTCCATGGGGAACATTCAGCATGCGTGGTTCTGAAATGAAGAATTCGCTCGTTCAAGAATACCTTCGGGTTTTAAATACAGCTGACAAGGAAGAATTAAAAAAACTGAAGGGAATTGGGGAGAAGAGAGCAACCTTCATACTTGAGCTTCGTGAAGAATCTCCAGAACCTTTCAAGAGTCTAGATGATTTAAAGGATATTGGACTTTCGGCAAAGCAGATTAAAGGAATGATGAAGAAGGAAGTTGGAGAGCTTTTCAGTTAG 2019 0.4146 MVSNQFDRAGSNPGRKVRVVAKIRGFSGSEANSEPSASRAVEWISVNRENSEDVVTISFGNQSSSRYLVDYFYKEHEDNEMIFSREVKPLVSAAFEGHNSTVIAHGARGSGKTCVIQGSAERPGLAMLAIAEFLSMAEKNRKSISVSFYEVDHQEHAVDLLNPEQPPILVFEDRGRIQFKGLTQIPVKSTTDFQNLYLAASSAQKGAPKKGGCERFRRSHMGLIVHVFTQNENVECLLSKMNFVDLAGYEDARKKSGDGSYLAEINKINKSIYALLNVCHALTTNECRVPYRESKLTRMLQDSLRGTSKILLVSCLNPSFCQDSIYMVSLASRSCQVHRISFDSTKKIGSSARQMLNSHKNQIPKSVSGTAKKLHGSKLLEKKSGVAMKSARKGRKLFDEASHSAAKAEKDNSLSEAGNHVELNSEGEKENSFPASSHDVKLNLTVDNDDSSLNASTAVELNFSLVEKGISVDREDHQEQHTPFASNYSESEALSIAVQEDHNMNKENNSSRANEDGSPPISSQLRDLSNSLKLLYSSTPLCVQIPETESISLDNQMSADIVEPKTPVIEQNMSVNNKWDVMNAQSPWGTFSMRGSEMKNSLVQEYLRVLNTADKEELKKLKGIGEKRATFILELREESPEPFKSLDDLKDIGLSAKQIKGMMKKEVGELFS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0688 672 MobiDBLite consensus disorder prediction 505 524 - -
Apr6g0688 672 PANTHER KINESIN-LIKE PROTEIN KIN-10C 16 667 - -
Apr6g0688 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 337 IPR027417 -
Apr6g0688 672 Gene3D Kinesin motor domain 3 337 IPR036961 -
Apr6g0688 672 Pfam Kinesin motor domain 43 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g0688 672 ProSiteProfiles Kinesin motor domain profile. 16 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g0688 672 SMART kinesin_4 14 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g0688 672 PRINTS Kinesin heavy chain signature 97 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g0688 672 PRINTS Kinesin heavy chain signature 240 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g0688 672 PRINTS Kinesin heavy chain signature 289 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g0688 672 Pfam Helix-hairpin-helix motif 610 657 - -
Apr6g0688 672 Gene3D - 596 670 - -
Apr6g0688 672 SUPERFAMILY RuvA domain 2-like 600 665 IPR010994 -
Apr6g0688 672 PANTHER KINESIN-RELATED 16 667 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0688 Apr-Chr6 10499008 10503839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0688 16 319 Calmodulin-binding Proteins AT5G65930 30.255 1.33e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0688 K10403 - gmx:100809612 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0688 6 10499008 10503839 Apr6g0688 6 10499008 10503839 ECH