Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0686 ATGCCAGTTACAAAACTCAAAGTCTCTGACACACCAGATGTCATGAAAACAGAAGACAGAATAGATACCATAATTAAACAGGCAATTGGCAGAGAACCTGTCCTTTCTTTTCCAAGGGCCAGTGAAAGCCCTGTACAGTGGATTCAATTACTCCATGCTTTAGATCAGCAAGAATTTCCAGGGTGGCCTTTGCTCTCTCCTCTGAAGGTTCAGTTGCAGAAGTGTGACAAGTGTTCCAGAGAGTTTTGCTCTTCAATTAACTATAGAAGACATATACGTGTACACCACCGGTTGAAAAAGCTTGATAAGGATTATACAAAAACTAGGGATCTTCTAGGAGCTTATTGGGATAAGCTCTCTGTAGAAGAAGCAAAGGAAGTTGTATCGTTTGAAAATGTGATGCTGGAGGAAGTTCAGGGTTCTTCAATATTAAATGCTCTGACAAGTCTTGTTCGAAAACAAGGATTTTCTCCACTTCCACAGTATTATCTGAGGGCTGGTGCTGCCCTTTTGGATATTGTTCAATCTAAACCTTCCAGTTTCCCTATATCTTCCCAGGAGTTGTTCAGTACCCTTGATGATGCTAGTGAAAAAACATGTTTATGGGGAACGGCAGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGTTAGAACAGAAATTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCATTGAAATGCCAGAAGCAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAGCGCCAGAAGAAGCTTAGACAAAAAGAACAGAAGGCTAGGGAACAAAGAGGCAAGGATGAGACAGAAATTAAAGGGAATACTGCCAGTACTGTAAAGGCTTTATCACCTGAAGAAGCATCTTTGGATACATACAATTTTCCGGAAAATGCACTTTCACACGTACCTTTCCAATGCCCTGAAACTAGTGAAGGAATAGATGGAGAAACAGATACTCATTCAGGGTATGAATTTGTCACTGATCAGAATATTGGGAGACAGTCAGCGCATGGTCAGAATCATCAGCACATAGCAGTTGCCAGATGGCAGCAGGGGCTGCCAAAATCACAGTGGGCTGTAGCCAATGCTTTGCATACAAATCAAAATTCTCAAATTTCAAAAGTTGATTTGATTCAAAAACATGGAACCCACCGTGATAGTAGTAAAGTATGGAGTCGAAAACCTAAGACAGAAATTGACAAGGTGGTTTTAAAAACCATTATTGAGGGAGAATCCAACCAAGTTAAGAATCATGAAGTTTTGATAGGATCTATATCTGTTAACCTTGGCAATTCCAACCAATTAGAGGGTAATATGGTGGCTTCCCAAGAGGACTGCATGGTTGAGAATGTGGCCAAGCAGAATAGTTTTCAGGATAAGCCCACAAAACCTGATTTTGTCACATGTGGCAATAATCGGTTAACAGTTAAGTGTTGGAGGCCAGTTAGCCGGCTTGAAACTAAAGATCCATCTCCAGTTCAAAGAGGTGAAACAGATGTTGATGCACTTCATGGAAATGGAGGTGGTCAAAACTTGTCAGGTCCAAGTTGTTTAGGGTTGTGCTCTGTAGATGGTAATGATATTGGTTTTGAAAACGATTTCTCCCATCTAGAGGGCAGAGTGGATCCAGGGAGCTTACGGTTTTCCAGCTGTGCTGCAAAAGCTTTTCTTGCACAAAGATGGAAAGAAGCAATCTTATCAGATCATGTAACATTGGTTGTTTCCCATGACTCTGAACCTCCGGGGTGCCAGGAGATACAGGATTTTAAAATAGCTGAATGTCAATCTTCTGATGTTGATAAATGCAACATTCCCGCAATTGCAGAGAACACGTTGCCTGGAACCACCAGAGTTACTAAATCCAAACCCAGGTTGAAGTCTGAAAAAGGAACCAAGATCAAGTATATTCCTAAACGGATGACAACTACCTAA 2016 0.4137 MPVTKLKVSDTPDVMKTEDRIDTIIKQAIGREPVLSFPRASESPVQWIQLLHALDQQEFPGWPLLSPLKVQLQKCDKCSREFCSSINYRRHIRVHHRLKKLDKDYTKTRDLLGAYWDKLSVEEAKEVVSFENVMLEEVQGSSILNALTSLVRKQGFSPLPQYYLRAGAALLDIVQSKPSSFPISSQELFSTLDDASEKTCLWGTAVSMQRYVFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALKCQKQLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQRGKDETEIKGNTASTVKALSPEEASLDTYNFPENALSHVPFQCPETSEGIDGETDTHSGYEFVTDQNIGRQSAHGQNHQHIAVARWQQGLPKSQWAVANALHTNQNSQISKVDLIQKHGTHRDSSKVWSRKPKTEIDKVVLKTIIEGESNQVKNHEVLIGSISVNLGNSNQLEGNMVASQEDCMVENVAKQNSFQDKPTKPDFVTCGNNRLTVKCWRPVSRLETKDPSPVQRGETDVDALHGNGGGQNLSGPSCLGLCSVDGNDIGFENDFSHLEGRVDPGSLRFSSCAAKAFLAQRWKEAILSDHVTLVVSHDSEPPGCQEIQDFKIAECQSSDVDKCNIPAIAENTLPGTTRVTKSKPRLKSEKGTKIKYIPKRMTTT* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0686 671 Coils Coil 249 290 - -
Apr6g0686 671 MobiDBLite consensus disorder prediction 277 305 - -
Apr6g0686 671 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 100 IPR013087 -
Apr6g0686 671 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 669 - -
Apr6g0686 671 MobiDBLite consensus disorder prediction 277 301 - -
Apr6g0686 671 ProSitePatterns Zinc finger C2H2 type domain signature. 75 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0686 Apr-Chr6 10446623 10456527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0686 19 667 C2H2 Transcription Factor Family AT4G25610 41.106 4.92e-141 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr6g0686 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0686 - - gmx:100809067 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0686 6 10446623 10456527 Apr6g0686 6 10446623 10456527 ECH
Apr6g0686 6 10446623 10456527 Apr8g2174 8 32269997 32277954 PCT