Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0672 ATGGCAAGTGAGGTTGTGAAGAAGGAAGAATCTCTTAATCTCAAAATCACTAACAAGAGCCATGTGAAACCTGAAGAGAACATTGGGAAGAAAGAGTACCAATTGGTCACTTTTGATCTTCCCTACCTAGCCTTCTATTACAACCAAAAGCTACTAGTTTACATGGGTGAAGATTTTGAGGGTATGGTCCAAAAGCTGAAAATTGGGCTTGGTGTAGTCCTAAAGGAGTTCCATCAACTAGCTGGTAAGTTAGGGAAAGATGAAGAGGGTGTGTTTAGGGTGGAATATGATGATGATATGCTTGGTGTGGAGGTTATTGAAGCTGTTGCTGAAGAGATTGGTGTGGATGATTTAACTGTGGCTGAAAGTACTAGTAATTTGAAGGAGTTGATACCTTATAGTGGTATCTTGAATTTGGAAGGCATGCACAGGCCCTTGCTAGCAGTTCAGTTGACTAAGCTCGTAGATGGGCTTGCAATGGGCCTGGCTTTCAACCATGCTGTCCTAGATGGCACTGCCACATGGCAATTCATGACTTCGTGGGCCGAGATCTGCAGCGGAGCACCATCCACGTCGGCCTCACCCTTTCTTGACCGCACCAAGGCCCGGAACACTCGCGTGAAGCTGGACCTCACCTTACCCGAGCCCAAAAATCCACCAACATCCAACAGTGAGGCAAAGCCCGAGCCTGTACTCAGGGATACAATCTTCAAGTTCTCCGAGTCAAAGATCGACAAGATCAAGTCAACGATCAATGAAAACCCTCCATCGGACGGTTCAAAACCATTTTCAACCTTTCAGGCTCTCTCCACTCATGTTTGGCGCCATGTAACCCATGCACGTAACCTAAAGCCAGAAGACTACACCGTGTTCACCGTCTTTGCGGATTGCCGGAAAAGGGTTGAGCCGCCGATGCCAGAAACCTACTTTGGAAACCTAATTCAGGCAATTTTCACCGTCACGGCGGCCGGACTATTGACGGCCCAGCCGCCGCAATTCGGGGCTTCTTTGATTCAGAAAGCCATTGAAGCACATAATGCTAAGGCAATTGATGAACGTAACAAGGAGTGGGAGAGTGCACCAAAAATTTTTGAATTCAAAGATGCTGGGGTGAATTGTGTGGCTGTGGGAAGTTCCCCTAGGTTTAAGGTTTATGACATTGATTTTGGGTGGGGGAAGCCAGAGAATGTGAGGAGTGGAACTAATAACAAGTTTGATGGAATGATTTATTTGTATCCAGGGAAGAGTGGAGGGAGGAGCATTGATGTGGAGTTAACCTTGGAGCCTGAGGCTATGGGAAGATTGGAGCAAGACAAGGATTTTCTTTTGGAAGCATTAAACTAG 1344 0.465 MASEVVKKEESLNLKITNKSHVKPEENIGKKEYQLVTFDLPYLAFYYNQKLLVYMGEDFEGMVQKLKIGLGVVLKEFHQLAGKLGKDEEGVFRVEYDDDMLGVEVIEAVAEEIGVDDLTVAESTSNLKELIPYSGILNLEGMHRPLLAVQLTKLVDGLAMGLAFNHAVLDGTATWQFMTSWAEICSGAPSTSASPFLDRTKARNTRVKLDLTLPEPKNPPTSNSEAKPEPVLRDTIFKFSESKIDKIKSTINENPPSDGSKPFSTFQALSTHVWRHVTHARNLKPEDYTVFTVFADCRKRVEPPMPETYFGNLIQAIFTVTAAGLLTAQPPQFGASLIQKAIEAHNAKAIDERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMGRLEQDKDFLLEALN* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0672 447 Pfam Transferase family 14 441 - -
Apr6g0672 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 441 - -
Apr6g0672 447 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 17 441 - -
Apr6g0672 447 Gene3D - 11 213 IPR023213 -
Apr6g0672 447 Gene3D - 214 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0672 Apr-Chr6 9955386 9958818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0672 64 444 Monolignol Biosynthesis Gene Families AT5G48930 26.933 2.20e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0672 K19747 - gmx:100818158 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0672 6 9955386 9958818 Apr6g0672 6 9955386 9958818 ECH