Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0666 ATGTCGTCGCCGGGGTTCACTGGCGGTGGAGGAGCATCGGAGTTCTTTGGCGGAGCGGGTGGTTTCGCTGGCAGATCCATTCCGGCAGCGACCGCCATGAACAACCCAAACGCAACCGCATCTGTGGCCAACAACCTTCACCCTCTCTACCGAACCCAACAGCAACTCCCTGCAATGTTTCTAGATCCCTCCTCTCAGATCACTCAGCGCCCTACACCATCCGTCATCGGCAAACGCACCCTCACCGAATTCCAAACCTCCAGCAACACGACCAACAACAACCTTAACCTAAACCACAACCAGGTTCTTTCAAACCTTTTACTTCGTTCCGTTAAGCCAAGAACAACTTTTACGCATACATCTCCTATGTCAGCCATGGATTATTCCATTCCTGAAATCCATACGCAGCGTTTTGGGGCTCCTTTACTACACCAGCTTCGCCCCCAGCCCATTAATCTCCCCAACAACGGGTCCATACCCATCAACGGCCCAAATTTTTCTTACCGGAACTCAAATTTGGGTTTACCTCAGAACCGGGTTCAGATTCCGGTTCCCGCTCCTGTTCAGTCTTCTGAACCGGAAAAAAAGACCATGGACCACCGGCTTCAGGAATTGGCGAAACAACTTCTTGAAGATAACGACGATGAAGGAGAAGCTGATGCTGCGTCTGTTATAACCACCAGCGAGTGGTCTGAAACGTATCAGAACCTCATCAGTCCCGGTCCAACCGCTCCGGTTCAGAAACCTGTTTCTTCATCGCCTACTTCCTCTACCACGTCGTCTACCTCTTCTTCTTCATCTGTGGCTTCACCTGCTTCCGGTTGCTTCAAGCAAACCCTAATGGAAGCCGCATCTGCAATTACTGAAGGGAAAAACGACTCTGCCACGGAGATCCTGAACCGCTTAGCGCAGGGACCGAACCAGACTGGGAATTCAGATCAACGGTTAACCGATTGCATGGTTTCGGCTCTGAAATCGCGCATGAACCCGGTGGAAAATCCACCACCTGTGGCCGAGCTTTTCAGCAGGGAACATGCCGAGTCAACTCAGTTGCTGTTAGAGAACTCGGTGTGTTTCAAGGTAGGGTTCATGGCTGCGAATTTTGCGATCCTCGAAGCTGCATTTGAAGAGAAAACCGAGAACAGATTCTGCGTGGTGGATTTTGATATTGGACAGGGGAAGCAGTATTTGCACCTTCTCAACGCGCTCTCGGCCCGTAGCCAGAACGGGAAGGTTTCAACGGTGAAGATCGTGGCAGTGGCAGAAAACGGAGCCGAGGAGAGGGTGAGAGCTGTGGGAGAGATGCTGAGTCGACAAGCAGAAAGGTTGAGGATCGGGTTCGAGTTAAGAGTCGTGGTGACTCAAAAACTCGCCGAGTTGACTCGGGAATCGCTGGGTTGCGATGCGGACGAGGCGATAATGGTAAACTTCGCATACAAGTTGAATAAGATCCCCGACGAGAGCGTGTCAACAGAGAACCCGCGCGATGAGCTTTTAAGGCGCGTGAAGAGACTCGTGCCGCGCGTGGTGACAATTGTGGAGCAAGAGATGAACGCCAACACGGCGCCGTTTTTGGCTCGCGTGGCCGAGTCATTGTCATATTACAGCTCATTGTTTGACTCAATTGAAGCCACGGTTGGGAGGGACAACCCAAACCGAGTCAAGGTGGAGGAGGGACTGAGTCGGAAGATGTGCAACTCGGTGGCCTGCGAAGGGAGGGATCGCGTGGAACGGTGTGAAGTGTTTGGAAAATGGCGTGCGCGTATGAGCATGGCTGGGTTCCAGTTGAAACCACTGAGTCAAAACTTGGCCGAGTCAATAAAATCGCTACTTGCCTCGGGAAATAACCGAGTCAACCCAGCACTCACTGTGAAAGAAGAGAACGGTGGGATTTGCTTCGGTTGGATGGGAAGAACCCTCACAGTGGCATCTGCTTGGCGTTAA 1944 0.5216 MSSPGFTGGGGASEFFGGAGGFAGRSIPAATAMNNPNATASVANNLHPLYRTQQQLPAMFLDPSSQITQRPTPSVIGKRTLTEFQTSSNTTNNNLNLNHNQVLSNLLLRSVKPRTTFTHTSPMSAMDYSIPEIHTQRFGAPLLHQLRPQPINLPNNGSIPINGPNFSYRNSNLGLPQNRVQIPVPAPVQSSEPEKKTMDHRLQELAKQLLEDNDDEGEADAASVITTSEWSETYQNLISPGPTAPVQKPVSSSPTSSTTSSTSSSSSVASPASGCFKQTLMEAASAITEGKNDSATEILNRLAQGPNQTGNSDQRLTDCMVSALKSRMNPVENPPPVAELFSREHAESTQLLLENSVCFKVGFMAANFAILEAAFEEKTENRFCVVDFDIGQGKQYLHLLNALSARSQNGKVSTVKIVAVAENGAEERVRAVGEMLSRQAERLRIGFELRVVVTQKLAELTRESLGCDADEAIMVNFAYKLNKIPDESVSTENPRDELLRRVKRLVPRVVTIVEQEMNANTAPFLARVAESLSYYSSLFDSIEATVGRDNPNRVKVEEGLSRKMCNSVACEGRDRVERCEVFGKWRARMSMAGFQLKPLSQNLAESIKSLLASGNNRVNPALTVKEENGGICFGWMGRTLTVASAWR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0666 647 MobiDBLite consensus disorder prediction 235 272 - -
Apr6g0666 647 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 646 IPR005202 -
Apr6g0666 647 Pfam GRAS domain family 277 647 IPR005202 -
Apr6g0666 647 ProSiteProfiles GRAS family profile. 267 647 IPR005202 -
Apr6g0666 647 PANTHER SCARECROW-LIKE PROTEIN 8 70 646 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0666 Apr-Chr6 9745236 9747979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0666 41 647 GRAS Transcription Factor Family AT5G52510 47.476 1.06e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr6g0666 GRAS 9.6e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0666 - - gmx:100788551 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0666 6 9745236 9747979 Apr6g0666 6 9745236 9747979 ECH