Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0662 ATGGATTCTAATACTTCCATTGATGATAAGAGTGAAAGTAGACTCTATATCGGTAACCTAGACCTTAGAATTACAGAAGCTTCCCTGCTTAAAATGTTTTCTCCGTTTGGAAAAATCATTTCCGAGGACTTCCTATGGCACACGCATGGCCCAAAACGTGGGGAGCCACGTGGTTTTGCTTTTATCCAGTATAGCACAAAGGAGGAAGCAGAATTGGCCAAGGAGAAAATGCATGGGAGGCTAGCATGTGGCCGAGCATTGGTTGTTCGTCTTGCCAGTGAGAAATACCCGTTGGAAGCAGCTGATAACCCTACAAAAGCAGCAAGTGAAGGGCACAAAATGCATCTCAGTGGTGGCAGCAGCATAGGACAGACAAGTCGTAGTGCAAAAATAGCTGCAATAAAGAATAAACTGAAATCCATAGAGGAGAGCTCCAGGACCAAGAAGCAGAAGCAAACTGACAACATTTCTTGA 474 0.443 MDSNTSIDDKSESRLYIGNLDLRITEASLLKMFSPFGKIISEDFLWHTHGPKRGEPRGFAFIQYSTKEEAELAKEKMHGRLACGRALVVRLASEKYPLEAADNPTKAASEGHKMHLSGGSSIGQTSRSAKIAAIKNKLKSIEESSRTKKQKQTDNIS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0662 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 94 IPR000504 GO:0003723
Apr6g0662 157 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 4 153 - -
Apr6g0662 157 PANTHER RNA-BINDING PROTEIN 18-RELATED 4 153 - -
Apr6g0662 157 SMART rrm1_1 14 90 IPR000504 GO:0003723
Apr6g0662 157 SUPERFAMILY RNA-binding domain, RBD 6 98 IPR035979 GO:0003676
Apr6g0662 157 CDD RRM_RBM18 14 93 IPR039157 -
Apr6g0662 157 MobiDBLite consensus disorder prediction 136 150 - -
Apr6g0662 157 MobiDBLite consensus disorder prediction 102 157 - -
Apr6g0662 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 87 IPR000504 GO:0003723
Apr6g0662 157 Gene3D - 2 155 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0662 13 95 Eukaryotic Initiation Factors Gene Family AT3G16380 34.940 1.98e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0662 K24527 - gmx:100804800 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0662 6 9676009 9678780 Apr6g0662 6 9676009 9678780 ECH