Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr6g0662 | ATGGATTCTAATACTTCCATTGATGATAAGAGTGAAAGTAGACTCTATATCGGTAACCTAGACCTTAGAATTACAGAAGCTTCCCTGCTTAAAATGTTTTCTCCGTTTGGAAAAATCATTTCCGAGGACTTCCTATGGCACACGCATGGCCCAAAACGTGGGGAGCCACGTGGTTTTGCTTTTATCCAGTATAGCACAAAGGAGGAAGCAGAATTGGCCAAGGAGAAAATGCATGGGAGGCTAGCATGTGGCCGAGCATTGGTTGTTCGTCTTGCCAGTGAGAAATACCCGTTGGAAGCAGCTGATAACCCTACAAAAGCAGCAAGTGAAGGGCACAAAATGCATCTCAGTGGTGGCAGCAGCATAGGACAGACAAGTCGTAGTGCAAAAATAGCTGCAATAAAGAATAAACTGAAATCCATAGAGGAGAGCTCCAGGACCAAGAAGCAGAAGCAAACTGACAACATTTCTTGA | 474 | 0.443 | MDSNTSIDDKSESRLYIGNLDLRITEASLLKMFSPFGKIISEDFLWHTHGPKRGEPRGFAFIQYSTKEEAELAKEKMHGRLACGRALVVRLASEKYPLEAADNPTKAASEGHKMHLSGGSSIGQTSRSAKIAAIKNKLKSIEESSRTKKQKQTDNIS* | 158 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr6g0662 | 157 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 13 | 94 | IPR000504 | GO:0003723 | |
Apr6g0662 | 157 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN | 4 | 153 | - | - | |
Apr6g0662 | 157 | PANTHER | RNA-BINDING PROTEIN 18-RELATED | 4 | 153 | - | - | |
Apr6g0662 | 157 | SMART | rrm1_1 | 14 | 90 | IPR000504 | GO:0003723 | |
Apr6g0662 | 157 | SUPERFAMILY | RNA-binding domain, RBD | 6 | 98 | IPR035979 | GO:0003676 | |
Apr6g0662 | 157 | CDD | RRM_RBM18 | 14 | 93 | IPR039157 | - | |
Apr6g0662 | 157 | MobiDBLite | consensus disorder prediction | 136 | 150 | - | - | |
Apr6g0662 | 157 | MobiDBLite | consensus disorder prediction | 102 | 157 | - | - | |
Apr6g0662 | 157 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 15 | 87 | IPR000504 | GO:0003723 | |
Apr6g0662 | 157 | Gene3D | - | 2 | 155 | IPR012677 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr6g0662 | 13 | 95 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 34.940 | 1.98e-09 | 53.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr6g0662 | K24527 | - | gmx:100804800 | 252.292 |