Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0656 ATGAATGGCCCCACCAAAAAACCTCCATTAAAATGTTCCACACACAACAAAGAAAGTTGTGGCCTCTGTTCATCCTCCTTTATAAACCTTCACTCTAAACCTTCCCTCTTCACTCTCATTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCACAATTCTCAAGCTCAGCTCAAACTTCTATCATGGCGGCAGGACTCTCCGCCGCCATAACCATGAAGCCCCTCCTCCGTTTCCAGCAATCCTTCTTCCCCAAACCAACTCCAACACTACCCTTCTCTCCCTTAAGAACTCTCCATCACAGGACAACCCTTAGAACCCAAAAATTCACAGCCTTCACCGTTTGTGTGCTCACGGAAGATCCAAAACATCACACCCACATGCAAACTGAGGAAGAAGAACCTCTTTCTCTTCAAGGGAATCACTCTCAAGTTGTGCCAAAACGAGTGGCAGAGAAATTGGCCAGAAAAAAGTCAGAGAGGTTCACTTACCTCGTTGCAGCAGTTATGTCTAGCTTTGGCATCACATCAATGGCTGTTTTTGCTGTTTATTATAGATTCGCTTGGCAAATGGAGGGTGGAGAAGTTCCTTGGTATGAAATGTTTGGCACATTTGCTCTATCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAAGGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTTAACGATGTATTTGCAATAATCAATGCTGTCCCTGCCATCGCTCTGCTTTCCTACGGATTCTTCCACAAGGGATTGGTCCCTGGCCTTTGTTTCGGTGCAGGTCTTGGAATTACGGTATTTGGTATGGCCTACATGTTTGTACACGACGGTTTGGTTCATAAGAGATTCCCAGTGGGGCCCATTGCCAACGTGCCCTATTTCAGAAGGGTAGCTGCGGCTCACCAACTTCACCATTCAGACAAGTTTAATGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAAAAGGTGGGAGGGCTAGAAGAGCTGGAGAAGGAGATAAGTAGGAGAACAAGATCATACAAAAATAGTTCATGA 1104 0.4692 MNGPTKKPPLKCSTHNKESCGLCSSSFINLHSKPSLFTLIPLSLSLSLSLPQFSSSAQTSIMAAGLSAAITMKPLLRFQQSFFPKPTPTLPFSPLRTLHHRTTLRTQKFTAFTVCVLTEDPKHHTHMQTEEEEPLSLQGNHSQVVPKRVAEKLARKKSERFTYLVAAVMSSFGITSMAVFAVYYRFAWQMEGGEVPWYEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKELEKVGGLEELEKEISRRTRSYKNSS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0656 367 PANTHER BETA-CAROTENE HYDROXYLASE 63 365 - -
Apr6g0656 367 Pfam Fatty acid hydroxylase 210 337 IPR006694 GO:0005506|GO:0008610|GO:0016491
Apr6g0656 367 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 63 365 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0656 Apr-Chr6 9565325 9568452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0656 62 280 Chloroplast and Mitochondria Gene Families AT4G25700 61.947 1.23e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0656 K15746 - gmx:100785541 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0656 6 9565325 9568452 Apr6g0656 6 9565325 9568452 ECH
Apr6g0656 6 9565325 9568452 Apr8g2160 8 32170105 32172471 PCT