Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0652 ATGGCGTTGTTTTCACTTCTATTTAACTCTCTACCCTTCTCTCTTTATCAAAATGATATGCAGCAAACTAGCAATGTAGCATACTACGCTTCTCTGTTGATTAAATTCTGGGAAAAGAACTTTGAGAAGTTATCATCAGATCATAGTCATGAGTCGGTCCTACCAAGCCAGTTTTATCCACTTGCAAAGGGCATTGCAAAAGATGGGTATCTTAAAGGTTTGGAATCAAGTGGTAAATTCTGTCCCATAGCCAATGATGTGGGTAAGGTGTGTTACGTCAGCCTTAAGGAGATAGCGGATGCTACAAATGGATTGGCTAAAGAAAATGTGATTGGAAGTGGTGAAAATGGGATTGTTTATCTTGGTTTATTGCCAAATAATAGACGGGTGGCTGTGAAGAGATTACTGTGTGACAGTGGCCAACCTGAGGAATATTTTGCATCTCAAATGGAAGCAATTGGACATATAAAGCACAATAACCTGGTCAAATTGCTTGGATACAATTCTGAGGGTGCTTGCAGGATATTCATATCTGAATATGTAGAAAATGGAAATCTGCATTGTTGGCTTCATGAATTTCCTGGACAAATCAGCCCTCTATCATGGGATATCAGGTTAAACATTATCGATGATGTGGCAAAAGGACTGGCATACCTTCATGAAGAAGTTAAACCAAAGATTCTCCATGGTACCTTAAAATCCAGCAATATATTACTCGATCGCCAATGGAATCCAAAAATATCTGATTTTGGCCTTGCTAAGGTTCTCAGTCCCGAATGGAGTCACATTAATTGCCAAGCATTGGGTTATGTAGCTCCAGATTGTCATTCCACTAGCACCTTCACTGAGGGTAATGACATTTATGGTTTTGGATTACTTATTATGGAGATTATAGCAGGAAGGAAACCATTATATCACAGTCTACCCGAGGGTCATATAGTAGATTGGTTCAAATCAATGATTTCCAATGGAAAGATTGCTGACGTGGTGGATCCAAAATTGCCTGAAAAGCCTTCTTCCAAGGAACTTAAACGGATTATTTTGGTTGCTCTACGATGTGTAGATCCTGATGTAAATCCTAGACTCAAAATGGGAGATGTGGTTTGCATGCTTGAGAACAACATACTTCTTTTTGAGGAACACCGAATTGCCATGGAGATTTGTGAAAACAGTCACTCTCCACAGAGTCAGCAAAGTTAG 1200 0.3942 MALFSLLFNSLPFSLYQNDMQQTSNVAYYASLLIKFWEKNFEKLSSDHSHESVLPSQFYPLAKGIAKDGYLKGLESSGKFCPIANDVGKVCYVSLKEIADATNGLAKENVIGSGENGIVYLGLLPNNRRVAVKRLLCDSGQPEEYFASQMEAIGHIKHNNLVKLLGYNSEGACRIFISEYVENGNLHCWLHEFPGQISPLSWDIRLNIIDDVAKGLAYLHEEVKPKILHGTLKSSNILLDRQWNPKISDFGLAKVLSPEWSHINCQALGYVAPDCHSTSTFTEGNDIYGFGLLIMEIIAGRKPLYHSLPEGHIVDWFKSMISNGKIADVVDPKLPEKPSSKELKRIILVALRCVDPDVNPRLKMGDVVCMLENNILLFEEHRIAMEICENSHSPQSQQS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0652 399 Gene3D Phosphorylase Kinase; domain 1 77 180 - -
Apr6g0652 399 ProSiteProfiles Protein kinase domain profile. 105 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0652 399 Gene3D Transferase(Phosphotransferase) domain 1 181 386 - -
Apr6g0652 399 SUPERFAMILY Protein kinase-like (PK-like) 87 372 IPR011009 -
Apr6g0652 399 PANTHER OS01G0323000 PROTEIN 57 392 - -
Apr6g0652 399 Pfam Protein kinase domain 107 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0652 399 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Apr6g0652 399 PANTHER BNAC04G54280D PROTEIN 57 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0652 Apr-Chr6 9524532 9528140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0652 94 393 Receptor kinase-like Gene Family AT3G58690 36.859 7.05e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Apr6g0652 Pkinase 4.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0652 - - aprc:113866630 809.29