Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0649 ATGGTATCCAAAAACCCGAACCCGCCCGAGGGTTTCTACTTGGATCCGACTGGTATGGCTCTGCCCGGGTTGCCACCCTTCGCCTCCGTCTCCGCTGCCGCTGCCACTGCCACGGCGGCTTCCGCCACGAACTCGTCGGAGGAAGCCGCCAAGAAGATCCGGAAGCCCTACACTATCACCAAGTCGAGGGAGAACTGGACCGAACCCGAACACGACAAGTTCCTCGAAGCGCTTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACTGTTATACAGATACGTAGCCATGCGCAGAAATACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCTCCACCCAGGCCTAAAAGAAAAGCTGCCCACCCATATCCTCAAAAAGCTTCCAAAAATGCTCCTGTACTCTCACAAGTACCAGGATCTTTTCAATCTTCATCTGCTTTGCTTGAACCTGGATACATCCTGAAGAATGATTCCTTACCAATGCTTAATACGCCTATTTTGAACACTGTGGTGTCCTGGTCCAACAACACCTCACAAACTGCCAATTTATCCCCTGTGACAAAAGTGAACAATCCTTGTAGTAGCAGTGAAAGCACTCCTAAAGTGTGGCCGGTTGGTGAATCTAAAGTTCAAGGGAATAAAAACCATCCATTAAGAGTTCTTCCAGATTTTACTCAGGTATACAGCTTCATTGGCAGTGTATTTGACCCAGGTGCAGCTGAGCATCTGCAAAAACTAAAAAAGATGGACCGTATAGATGTTGAGACGGTGCTACTGTTGATGAGAAACCTGTCTATCAATTTAACTAGTCCAGATTTTGAGGATCATAGAAAGCTGCTTTCATCATATGAAGTTGAACCAGAGACAAATAACTATATCAATGCAGAGAGACCCATGCACGATGAGCAGTTGAAGAGTGCTACTTAA 957 0.4598 MVSKNPNPPEGFYLDPTGMALPGLPPFASVSAAAATATAASATNSSEEAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVPGSFQSSSALLEPGYILKNDSLPMLNTPILNTVVSWSNNTSQTANLSPVTKVNNPCSSSESTPKVWPVGESKVQGNKNHPLRVLPDFTQVYSFIGSVFDPGAAEHLQKLKKMDRIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEVEPETNNYINAERPMHDEQLKSAT* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0649 318 CDD SANT 65 108 IPR001005 -
Apr6g0649 318 PANTHER PROTEIN REVEILLE 6 3 311 - -
Apr6g0649 318 Gene3D - 65 113 - -
Apr6g0649 318 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Apr6g0649 318 ProSiteProfiles SANT domain profile. 61 112 IPR017884 -
Apr6g0649 318 PANTHER SWI/SNF COMPLEX-RELATED 3 311 - -
Apr6g0649 318 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 61 110 IPR006447 GO:0003677
Apr6g0649 318 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Apr6g0649 318 MobiDBLite consensus disorder prediction 113 145 - -
Apr6g0649 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Apr6g0649 318 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Apr6g0649 318 SMART sant 62 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0649 Apr-Chr6 9466375 9472375 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr6g0649 Myb_DNA-binding 4.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0649 - - gmx:100783949 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0649 6 9466375 9472375 Apr6g0649 6 9466375 9472375 ECH