Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0635 ATGGCTAATGAGGATTGGGATCTGTTTGCCATCGTGAGAAGTTGCAAAGCTGCCACCTTTACTGCTACCACAAACACAGAAACCCCACCCACCACCACAACCACCAATACTACTGTTATCTCCAATACTAGATCATCTCAAGACAACACTTGCTTGGACGCTTTCACTGTTACCCAAGAAAATGGCTCATTCTCTTTTCCCAATCTTGTGCAACCAAGAACCAATGAGTTCCAAGAGCTTCAACAATTGTTAATGAACTTCAACCCCACCACCACCACCACCACCACCTTCACTAGCACTAGCACTAGTGGCCTTGGCATCAATCCCAATTCCACTTTTTGTGACGTTGCAGGATTCATTGGACAACAGCAGATACAGCAAGGTCACCACCATCTTGTTGTTCCTACTCCCACAACTTACACCTCCATTGGAGCACCCTCCACTACAAGCTTTGATAGATTCCATCACAACCCAAAACAACAACAACAACAACAACAGCAACCCCAAACCCCAGAACAACAACAACAGCATCAAAATCAACCACCCCTACAAGTACCCCAAATAAGTCCCATGCTTTTACCAAATACACAACCACAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGCCATGTAACCGCAGATAACATCTCAGCAGACTTGTGGGCATGGCGAAAATATGGACAAAAACCCATCAAAGGTTCTCCATATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGATGTGCCGCGAGAAAGCAAGTTGAGCAGAGCACAACGGAACCGCACATGTACATCGTCACATACACCGGCGACCACAAGCACGCCAAACCTGCTCACAGGAACTCCCTCGCCGGTAGTACCCGGAACAAACACTCCACGACCCGTTTACCCGCAACACGTGAAACCGGGTTACAATGGATAAAAGGAAGCCAAAGTTCATCAAGTTCAGCGCATTCTCCCATGCCATTAAGTTCCGGTTCACTGCAAAGAGAGGAGGCTAGTGCCGCCGCCGGTGATCCCGAATGCCCAGACCGCCCAGACCCGGAAACAGAACCCGACTCGTCCTCCGAAAACGACGACGATGTTTTGATACCCAACACGACAGCCATGTCGGACGCCGTTCTCTTGGGATTAACCCATTTCTACGGTAACAAAACCAAGAGGGATGGGTTGGATCCGAATAACGTTCCCGGGGCTGAATGTGAATCCTCTGAGAACAACCGGGTCAAACCCGGTTGA 1260 0.4833 MANEDWDLFAIVRSCKAATFTATTNTETPPTTTTTNTTVISNTRSSQDNTCLDAFTVTQENGSFSFPNLVQPRTNEFQELQQLLMNFNPTTTTTTTFTSTSTSGLGINPNSTFCDVAGFIGQQQIQQGHHHLVVPTPTTYTSIGAPSTTSFDRFHHNPKQQQQQQQQPQTPEQQQQHQNQPPLQVPQISPMLLPNTQPQTPRSRKRKSQQKKMVCHVTADNISADLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVEQSTTEPHMYIVTYTGDHKHAKPAHRNSLAGSTRNKHSTTRLPATRETGLQWIKGSQSSSSSAHSPMPLSSGSLQREEASAAAGDPECPDRPDPETEPDSSSENDDDVLIPNTTAMSDAVLLGLTHFYGNKTKRDGLDPNNVPGAECESSENNRVKPG* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0635 419 MobiDBLite consensus disorder prediction 289 338 - -
Apr6g0635 419 MobiDBLite consensus disorder prediction 137 214 - -
Apr6g0635 419 Gene3D WRKY domain 206 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr6g0635 419 ProSiteProfiles WRKY domain profile. 218 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr6g0635 419 MobiDBLite consensus disorder prediction 279 375 - -
Apr6g0635 419 MobiDBLite consensus disorder prediction 137 203 - -
Apr6g0635 419 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 392 - -
Apr6g0635 419 SMART WRKY_cls 223 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr6g0635 419 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 392 IPR044810 GO:0003700
Apr6g0635 419 MobiDBLite consensus disorder prediction 390 419 - -
Apr6g0635 419 Pfam WRKY DNA -binding domain 225 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr6g0635 419 SUPERFAMILY WRKY DNA-binding domain 218 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0635 Apr-Chr6 9316442 9317982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0635 202 297 WRKY Transcription Factor Family AT5G52830 77.083 9.45e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr6g0635 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0635 - K13425 aprc:113866622 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1292 10 25202946 25204662 Apr6g0635 6 9316442 9317982 ECH
Apr4g2277 4 31843455 31845442 Apr6g0635 6 9316442 9317982 ECH
Apr2g1236 2 18598087 18599336 Apr6g0635 6 9316442 9317982 ECH
Apr6g0635 6 9316442 9317982 Apr6g0635 6 9316442 9317982 ECH
Apr6g0635 6 9316442 9317982 Apr8g2152 8 32116963 32118191 PCT