Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0622 ATGTCCACAGAAGGGAACGAGAAAATTTTTTATTTCAGATCATGCACGTATTTGCCCCCCCGAGTAAATTCAGAGAAGCTATGGAGTAACCTAAGGGGTTTACCTTCAGAAAATGCTTTGCCAATGTTGCAGATGCAGATGTGCCTCATCTTTTTTGCAACTTTTTTCTTCCACCTCTTTTTGGGTCGTCTAGGAATTCCCAAATTCACCTCTATGAGCATTGTTGGCATAATCTTTGCAACTACCTTCAATGAAATATGGGCTGAGAGGAGGAAAAAGTTGTTCTTCTTTGATTCACAAGCAAATCTGGGGTTGCTTTCTGCATTTGGTTACATGCTTTTTTTGTTCTACATAGGGGTCAAAACAGATATGAGTGTGGTGCACAGGAGTAGAAGGACTGCCACTAACATAGGGTCTATTGCAATAGTGGCTCCCTTTTTATGTGGCGTGGCTTTTGTGCATTTTCACTCAAGAAAATACCTTGACCTTGCTCAACAAACAAAACTTCTTGTTATTAGTGGTTTGTTCTCTATGACCCCTTTTCCTGTCATTTCCTCAGTTTTAAGTGATCTAAAGATCTTGAATTCGGAGTTGGGAAGATTAGGTCAGTCCTCAGCTCTAGTTGCTGAGATATTTAATGTTTTCATGATATCAATCTTGGCATTCACTAAAATCATATACCAAAGTCCATCAAGTGCTTGGATTTACCTTACAGCTGCAATTTTGTTTATGTTATCGGTTATATTCATCATACGCCCTGCCATGTTTTGGATTATAAAACAGACCCCAGAGGGTTCCTCTGTAAGTGATCACTATGTTTATTGTGTCCTTATAATGGCTTTGTTGTCATCATATGCCACACATCGTTTTGGGTTCTTTGCTCTCTTTGGGCCTTTTATATTGGGTTTGGCTATTCCTGAAGGGCCTCCCTTAGGCACTGCCATCATTAAAAAGATTGATACTTTTGTTAATGGGATTTTGATGCCTATATTTGTGACTACCTGTGCAATGAGGATAGACCTCAGAGATTTCATGAATTGGAGAGACAAAGTTGATGGAAAAGTTGATGACTTCATGGTGCAAACTGTGGTTGTTATTATAGTAACTTCCCTTGTCAAAATTATTGCTTGCACGTTGCCTCCTCTATATAGGAGCATGCCTTTGAACGATGCTATATCTCTCTCTTTGATTATGAATTGCAAAGGCATAGTTGAAATGGCTGGATACTCGGTGGTCAGAGATGTCATGGGCGTGCCTGATAATGTCTTCGCTTTGGTGATGATGTGCATCATAGTGAATGCCACAGTGACGCCAATGATCTTGAGTAACCTCTACGATCCTATGAAGAAATACACAGGTTACACAAAGAGGAACATTCTTGATCTCAAAAGCAACACAGAGTTTAGAGTTCTGGCATGCATTCATAGACCCGACAACATTCCCTCAACAATAAACCTTCTAGAAGCAACATACCCCGCAAAAGAAGAACCAGTTTGTGCCTATGTACTACAACTTATAGAACTTATTGGAAGGGCATCACCAATATTCATCTGTCACCAGTTGCAAAAGAAGAGAAATGACTCAATTAGCTTCATGGCTGAGAAACTCATAGATGCTTTTCAAAACTTTGAGCAAGAGTTCAAGGATGCTTTAGTTGTCAACACTTTCACAGCTATTTCACCAGCAGAGATGATGTATGATGACATTTGCACATTGGCACTTAACAAGTTCACATCACTCATAGTTTTACCATTCCATAAAAAGTGGTCTTCTGATGGAAGCTCCACTGAGTTAGAAGATGAATCCTTAAGAGAGTTGAATTTTTGTGTCATGGAAAGAGCTCCATGTTCTGTTGGTATCTTAATTGAGAAAGCACAAATGACACATATTTTTTCACCTGAGACACCTTACACTGTTTGTTTGCTTTTCATTGGAGGAAAAGATGATAGAGAGGCGTTTTTCTTCGCCAAGAGAATGACCAAAAACCCACATGTTAGGCTTACTGTGGTTCGGTTCTTAGCTTCAAAAAACAATGAGTCAAACTCAGAGATCAAAGATTGGCAAACGGTGCTTGACACTAGGATTCTCGATGATATTAAGATGACCAACAAGGTGGGTGATGCTTATGTGAAGTACATAGAAAAGGTTGTTGAAGATGGACCAGAAACAGCTTTGGTGATTCGTTCATTGGCTAGTAAGTATGATTTGATCATTGTTGGGAGACAATTAGGGGTTGAAACTCCTCAAACTTCTGGGTTGCTACAATGGAGTGAGTATCCAGAACTTGGGGTGTTAGGAGATTTGCTAGCCTCCACTGATGCTGCTGGCAAAGCTTCTATATTTGTCATACAACAACAAAGGACAGCAAATGATGTTTGA 2379 0.3968 MSTEGNEKIFYFRSCTYLPPRVNSEKLWSNLRGLPSENALPMLQMQMCLIFFATFFFHLFLGRLGIPKFTSMSIVGIIFATTFNEIWAERRKKLFFFDSQANLGLLSAFGYMLFLFYIGVKTDMSVVHRSRRTATNIGSIAIVAPFLCGVAFVHFHSRKYLDLAQQTKLLVISGLFSMTPFPVISSVLSDLKILNSELGRLGQSSALVAEIFNVFMISILAFTKIIYQSPSSAWIYLTAAILFMLSVIFIIRPAMFWIIKQTPEGSSVSDHYVYCVLIMALLSSYATHRFGFFALFGPFILGLAIPEGPPLGTAIIKKIDTFVNGILMPIFVTTCAMRIDLRDFMNWRDKVDGKVDDFMVQTVVVIIVTSLVKIIACTLPPLYRSMPLNDAISLSLIMNCKGIVEMAGYSVVRDVMGVPDNVFALVMMCIIVNATVTPMILSNLYDPMKKYTGYTKRNILDLKSNTEFRVLACIHRPDNIPSTINLLEATYPAKEEPVCAYVLQLIELIGRASPIFICHQLQKKRNDSISFMAEKLIDAFQNFEQEFKDALVVNTFTAISPAEMMYDDICTLALNKFTSLIVLPFHKKWSSDGSSTELEDESLRELNFCVMERAPCSVGILIEKAQMTHIFSPETPYTVCLLFIGGKDDREAFFFAKRMTKNPHVRLTVVRFLASKNNESNSEIKDWQTVLDTRILDDIKMTNKVGDAYVKYIEKVVEDGPETALVIRSLASKYDLIIVGRQLGVETPQTSGLLQWSEYPELGVLGDLLASTDAAGKASIFVIQQQRTANDV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0622 792 Gene3D - 42 452 IPR038770 -
Apr6g0622 792 PANTHER CATION/H + ANTIPORTER 12 789 - -
Apr6g0622 792 PANTHER CATION/H(+) ANTIPORTER 4 12 789 - -
Apr6g0622 792 Pfam Sodium/hydrogen exchanger family 48 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0622 Apr-Chr6 9072185 9075477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0622 15 783 Antiporter Super Family AT3G44900 37.157 6.23e-176 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0622 - - gmx:100785558 1246.11