Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0602 ATGGTTAGTGCGATAAAAGCAGCTATTGGAGATTTACTGTTGACTTTCTTGTGGGTATTTTTTTCTTCAACGCTAGGATTGGTGACTAGCAGCATAATAAAAGCGCTTGATCTTCATGACGTGTCCTACAACGGTGTCGATTACCCTTTGATTTTGATAACTACTTCGCTCATCTTCGTCCTCGTTTTCATCTTCACCATTGTTGGCAATGCTTTGGGTGGTGCCAGTTTCAACCCCACCGGCAACGCTTCCTTCTATGCGGCTGGTGTTGGCTCTGACACCCTTTTCTCAATGGCTCTGCGTTTCCCTGCTCAGGCACTAGGTGCAGTGGGTGGTTTTCTGGCAATTATGGAGGTTATGCCACCACAATACAGGCACATGATTGGAGGACCTTCTTTGAAGGTTGACTTGCATACTGGAGCTGTTGCAGAAGGGGTGCTGACATTTATAATCACTTTTGTTGTTCTCCTCATCATACTCAGGGGTCCTCGTAGTGAGTTGGTGAAGACTTGGTTGATGGCGATGTCAATTGTGACTTTGATAATTGCTGGTTCTGCTTACACAGGACCAGCCATGAATCCTGCCATTGCTTTTGGTTGGGCATTCTTGGGAAACTGGCACAACACTTGGGACCAATTCTATGTTTATTGGATTTGCCCTTTCGTAGGAGCAATACTAGCTGCTTGGCTGTTCCGTATTGTTTTCCCAGCACCACCACCAGTGGTAAAACAGAAGAAAGCCTGA 744 0.4597 MVSAIKAAIGDLLLTFLWVFFSSTLGLVTSSIIKALDLHDVSYNGVDYPLILITTSLIFVLVFIFTIVGNALGGASFNPTGNASFYAAGVGSDTLFSMALRFPAQALGAVGGFLAIMEVMPPQYRHMIGGPSLKVDLHTGAVAEGVLTFIITFVVLLIILRGPRSELVKTWLMAMSIVTLIIAGSAYTGPAMNPAIAFGWAFLGNWHNTWDQFYVYWICPFVGAILAAWLFRIVFPAPPPVVKQKKA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0602 247 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr6g0602 247 SUPERFAMILY Aquaporin-like 3 241 IPR023271 -
Apr6g0602 247 PANTHER AQUAPORIN SIP1-1 3 246 - -
Apr6g0602 247 Gene3D Glycerol uptake facilitator protein. 1 241 IPR023271 -
Apr6g0602 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Apr6g0602 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr6g0602 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr6g0602 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr6g0602 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr6g0602 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr6g0602 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0602 Apr-Chr6 8599918 8606813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0602 2 246 Major Intrinsic Protein MIP AT5G18290 55.691 5.96e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0602 K09875 - gmx:100803227 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0602 6 8599918 8606813 Apr6g0602 6 8599918 8606813 ECH