Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0600 ATGAGATCTCTTTCAAGAGTCAGCAAAGGAAGAAGAATGCCTCCACATCCTCAACAACATAACAGTGATGATGAGTCGCGGGTGGAATTGGACCTCAACGTTGATATTTCAGCTTCGCCCACAAGGGCCCCTCCCATTCGGAAGAAGCATTGGACTGCGGAGGAACATAGGTTATTTCTCAGTGGTTTGAAGAAATATGGTAAGGGAAATTGGAAAAACATTGCAAAGCATTGCGTGGTGTCAAGAACTCCCATGCAAGTTGCTAGTCATGCTCAGAAATATTTCCTCCGTAAGAAGAATATGAACCAGGCGAAAAGAGAAAGCATCCATGACCTAACTCTAGATGATGATACACAGCCACCTTCTCAGAAAATGACTCGTTCTCACGACACGTTTTGCCAGCACAGTTGA 411 0.4453 MRSLSRVSKGRRMPPHPQQHNSDDESRVELDLNVDISASPTRAPPIRKKHWTAEEHRLFLSGLKKYGKGNWKNIAKHCVVSRTPMQVASHAQKYFLRKKNMNQAKRESIHDLTLDDDTQPPSQKMTRSHDTFCQHS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0600 136 PANTHER TRANSCRIPTION FACTOR KUA1 41 135 - -
Apr6g0600 136 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Apr6g0600 136 SMART sant 47 97 IPR001005 -
Apr6g0600 136 MobiDBLite consensus disorder prediction 115 136 - -
Apr6g0600 136 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 48 98 IPR006447 GO:0003677
Apr6g0600 136 ProSiteProfiles SANT domain profile. 46 99 IPR017884 -
Apr6g0600 136 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Apr6g0600 136 SUPERFAMILY Homeodomain-like 48 100 IPR009057 -
Apr6g0600 136 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 99 IPR017930 -
Apr6g0600 136 MobiDBLite consensus disorder prediction 105 136 - -
Apr6g0600 136 CDD SANT 51 95 IPR001005 -
Apr6g0600 136 Gene3D - 49 101 - -
Apr6g0600 136 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0600 Apr-Chr6 8590057 8590614 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr6g0600 Myb_DNA-binding 7.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0600 - - aprc:113866608 286.189