Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0597 ATGAGTGGAACCTCTTGCCATGATGCCACTCCTCCTCTACTTCAAGACCTAAAGGTCACCATTCACAAATCCTCCATGGTTTTTCCATCCAAAGAAATTGAGAGAAAGTCCTTGTTCTTGTCAAACATAGACAAGGTTCTCAACTTTGATGTAGAAACGGTTCACTTCTTTGGTGCCCACAAAGATTTTCCTCCTGATGTTGTGACCCAAAGGTTCAAGGATGCCCTAGAGGATGCCCTTGTGGTTTATGACTTCTTGGGTGGAAGATTGAAGATAAACTCTCACACCAACAGATTAGAGATGGATTGTAATGCAGAGGGAGCTGGCTTCGTGGTGGCTTCCAGCGATTACAGATTGGATCAGATAGGGGAATTGGATTATCCAAATCCATCTTTTGCACAATTGGTTCATAAGAATAAAGATTTTCTTAAACAGGCTGATGACCCACTCTGTGTCGCCCAGGTGACATCCTTCAAGTGTGGTGGCTTTGCGATTGGCATCTCAACAAGCCACACTACCTTTGATGGAATTAGCTTCAAAACCTTCTTAGACAACATTGCCTCAATAGCTGCTAAAACGCCCTTGGCTGTGACGCCGTGTCATGACAGGCACCTTCTAGCCGCCCAATCCCCTCCACGTGTCAGATTCTCACACCCCGAGATGCTCAAGATAGGTGACCTCCCCCCAGGGCTAGAATCTTGCATTTTTGAGGTCTCATCTGAGCAACTTGACTTCAAGGTTTTCAAACTAAGCTCCAATGACATCACCAAATTGAAGGAGAAGGCGAAGGCGAAGGCTTCTGTTAACGGTGGCACGTGTTGCTCCTCGGCACGTGTCACTGGCTTTAACGTTATTACTGCCCATATATGGAGGTGCAAGGCACTGTCTGGTGATGATGACCCAAATAGGTCATCAACTATACTATACGCTGTGGACATAAGATCAAGGTTGAACCCTCCATTGCCCAAATCATATGCTGGAAATGCTGTGTTAACCGCATATGCCACGGCTAAGTGTAAGGAAATAAAAGAAGGGCCATTTTTGAGGTTGGTTGAAATGGTGACTGAGGGTGCAAATAGGATGACAAATGAGTACGCAAAATCTATCATAGATTGGGGAGAGGTAAATAAAGGGTTTCCAAATGGGGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAAGAGGTGGAGTATCCTTGGGGGAAGCCAAAGTATTGTTGCCCTGTGGTTTATCAGAGGAAGGATATTATTTTGTTATTTCCTCCTAGTGATGGAGGTGATGGGGTGAGTATCATTGTGGCTCTTCCTCCCAAGGAAATGGAAAAATTCCACGCTCTCTTCAACAAGTTCTTGATTTTAGATTGA 1368 0.4488 MSGTSCHDATPPLLQDLKVTIHKSSMVFPSKEIERKSLFLSNIDKVLNFDVETVHFFGAHKDFPPDVVTQRFKDALEDALVVYDFLGGRLKINSHTNRLEMDCNAEGAGFVVASSDYRLDQIGELDYPNPSFAQLVHKNKDFLKQADDPLCVAQVTSFKCGGFAIGISTSHTTFDGISFKTFLDNIASIAAKTPLAVTPCHDRHLLAAQSPPRVRFSHPEMLKIGDLPPGLESCIFEVSSEQLDFKVFKLSSNDITKLKEKAKAKASVNGGTCCSSARVTGFNVITAHIWRCKALSGDDDPNRSSTILYAVDIRSRLNPPLPKSYAGNAVLTAYATAKCKEIKEGPFLRLVEMVTEGANRMTNEYAKSIIDWGEVNKGFPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYQRKDIILLFPPSDGGDGVSIIVALPPKEMEKFHALFNKFLILD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0597 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 15 452 - -
Apr6g0597 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 452 - -
Apr6g0597 455 Pfam Transferase family 17 446 - -
Apr6g0597 455 Gene3D - 15 222 IPR023213 -
Apr6g0597 455 Gene3D - 238 450 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0597 Apr-Chr6 8495223 8499066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0597 17 452 Monolignol Biosynthesis Gene Families AT5G48930 30.989 5.64e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0597 K13065 - gmx:100305576 756.518