Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0595 ATGGTATATTTATTTTCCTATTCTGTAAATTTCCATCTCTTCACCCTTGCATTGTTGTCAAGAAGCTATTTTCATTGTTGTACCATCGCAGTTGTCACTCTTGCTTATCTTTTCCTTCAATTCCCTTCTCGGTTAGTCTTCCTATTATCACCAACAATGGCTGATGGTCAAGAATCAGACAAGAACATTGAGATATGGAAGATCAAGAAATTGATCAAAGCATTGGAATCTGCTAGAGGTAATGGCACCAGCATGATTTCTTTGATTATGCCTCCACGTGATCAAATATCCCGGGTCACTAAGATGTTGGGTGATGAATTTGGGACTGCTTCAAACATCAAAAGTAGGGTGAACCGACAATCAGTGTTGGGAGCTATTACTTCTGCTCAGCAGAGGTTGAAACTATATAATAAGGTTCCTCCAAATGGGTTGGTTCTTTACACCGGAACCATCATGACTGAAGATGGCAAGGAAAAGAAAGTGACAATTGATTTTGAACCTTTCAAGCCTATAAATGCATCACTCTACCTCTGTGATAACAAGTTTCACACAGAAGCTCTAAATGAACTTTTAGAATCTGATGACAAGTTTGGTTTCATTGTTATGGATGGAAATGGCACCCTTTTTGGGACTTTAAGTGGAAATACTCGTGAGGTGCTTCACAAATTTACTGTCGACCTACCAAAGAAGCATGGTAGAGGAGGTCAGTCAGCGTTGCGTTTTGCTCGTCTTAGGATGGAAAAGAGGCACAACTATGTTAGAAAGACTGCAGAACTTGCCACACAGTTTTTCATCAATCCAGCTACTAGTCAACCTAATGTTTCTGGACTTATACTTGCTGGTTCAGCTGACTTCAAGACTGAGCTGAGCCAGTCAGATATGTTTGACCCTCGTTTGCAAGCAAAAATATTGAATGTGGTAGATGTTTCTTATGGTGGGGAAAATGGATTTAATCAAGCCATTGAGTTATCTGCAGAGATTTTATCTAATGTGAAGTTCATTCAAGAGAAACGCTTGATAGGGAAATATTTTGAAGAGATTAGCCAGGACACTGGGAAATATGTATTTGGAGTTGATGACACTTTGAAGACACTGGAGATGGGTGCTGTGGAAACGCTTATTGTATGGGAAAATTTAGATATTACTAGATATGTGCTGAAAAATAGTAGCACTGGTGAGATTCTCATAAAGCACTTGAGCAAGGAACAAGAGTCTGATCAAAACAATTTCCGTGATTCATCCACCTCTGCAGAATTGGAAGTTCAGGAGAAGATGCCATTGCTTGAGTGGTTTGCCAATGAGTACAAACGATTTGGATGCTCCCTGGAATTTGTAACCAACAAATCTCAAGAAGGGTCACAGTTTTGCAGAGGGTTTGGTGGCATTGGTGGAATTCTTCGCTACCAGCTTGACATTAGATCATTTGATGAGCTATCTGATGATGGAGAAGTGGATGAGGATTCTGATTAA 1470 0.3986 MVYLFSYSVNFHLFTLALLSRSYFHCCTIAVVTLAYLFLQFPSRLVFLLSPTMADGQESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIMTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKTLEMGAVETLIVWENLDITRYVLKNSSTGEILIKHLSKEQESDQNNFRDSSTSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDDGEVDEDSD* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0595 489 Gene3D eRF1 domain 2 188 329 IPR042226 -
Apr6g0595 489 Gene3D - 331 489 IPR029064 -
Apr6g0595 489 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 58 192 IPR024049 -
Apr6g0595 489 SMART eRF1_1_2 56 192 IPR005140 -
Apr6g0595 489 Gene3D eRF1 domain 1 52 187 IPR024049 -
Apr6g0595 489 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 53 489 - -
Apr6g0595 489 SUPERFAMILY L30e-like 330 472 IPR029064 -
Apr6g0595 489 SUPERFAMILY Translational machinery components 194 328 - -
Apr6g0595 489 Pfam eRF1 domain 3 333 470 IPR005142 -
Apr6g0595 489 Pfam eRF1 domain 1 70 190 IPR005140 -
Apr6g0595 489 Pfam eRF1 domain 2 196 329 IPR005141 -
Apr6g0595 489 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 53 489 IPR004403 GO:0003747|GO:0006415
Apr6g0595 489 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 64 469 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0595 Apr-Chr6 8459782 8463757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0595 53 489 Eukaryotic Initiation Factors Gene Family AT3G26618 91.533 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0595 K03265 - qsu:111999806 839.336