Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0587 ATGGAAGAGCCGGTTGTGGTGAACAAAGATGAGCCTTTGGATTTGCCGCCAGGTTTCAGGTTCCACCCTACAGATGAAGAGATCATCACTTGTTATCTCACAGAGAAAGTGTTGAATAGCAGTTTCAGTGCAATTGCTGTTGGGGAAGCTGATTTGAACAAGTGTGAGCCTTGGGACTTGCCAAAGAAAGCCAAGATGGGGGAGAAAGATTGGTACTTTTTTTGCCAAAGAGATAGAAAGTATCCAACGGGGATGAGGACCAATAGAGCAACCCAATCTGGGTATTGGAAGGCCACTGGCAAAGATAAAGAGATTTACAAAGGGAAAAACAATCTTGTGGGCATGAAGAAGACCCTTGTGTTCTATAGAGGAAGAGCTCCAAAAGGGGAAAAGACAAATTGGGTTATGCATGAATTCAGATTGGAAGGCAAATTCGCATGTTACCACCTTCCTAAGGTTGCAAAGGATGAATGGGTTGTGTGCAAGGTTTTCCACAAGAACAACACAGATGATAACAAAAGGGTCCCAATTATTCCTGGCCTTCTGAGAATGAACTCAATTGGAGAAGATCTATTTGATTTCTCTTCACTTCCACCTCTAGTGGATCCTCCTTATAACCACACCTCAAACAAGCACATTGGCAATAATTTCAAGGACACTAACAAACCATCATCATCATCAGATGGCTACTACCTTCCCAACTTCGTCAACAACAATCAGCACCAGATGCTAATGATCAAGCCAGACGAGAACACCAACAACTATTCCACCACCAACCCAAAGAACTTCAGTACTAATACAAATCCAATGGGAAGCACAAGCATTTCTCTTTCTCACCCTCAAATTCAAATCCAAAATCCATGTTCCCCTTTCCATTTCTCGGATTATTATATGCACCAAGGCAAGAACAGTGCCAAATACCTTCCTGGGTTGAACAAACAGTGCAAAATGGAGCAGTTCTCAAACACTAACCAGCCTGTGGTCAGTGTCTCTCAAGACACGTGTCTGAGCAATGACATAAACACTGACACTTCGTCTGTGGTTTCAAAGCAAGAAATGGGAAGGAATAAGGCATTGTATGAGGATCTTGAAGGTCCATCATCAGTTGCTACACTCTCAGATTTGGAATGCCTTTGGGATGATTACTGA 1149 0.4273 MEEPVVVNKDEPLDLPPGFRFHPTDEEIITCYLTEKVLNSSFSAIAVGEADLNKCEPWDLPKKAKMGEKDWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIYKGKNNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFACYHLPKVAKDEWVVCKVFHKNNTDDNKRVPIIPGLLRMNSIGEDLFDFSSLPPLVDPPYNHTSNKHIGNNFKDTNKPSSSSDGYYLPNFVNNNQHQMLMIKPDENTNNYSTTNPKNFSTNTNPMGSTSISLSHPQIQIQNPCSPFHFSDYYMHQGKNSAKYLPGLNKQCKMEQFSNTNQPVVSVSQDTCLSNDINTDTSSVVSKQEMGRNKALYEDLEGPSSVATLSDLECLWDDY* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0587 382 Gene3D NAC domain 24 171 IPR036093 GO:0003677|GO:0006355
Apr6g0587 382 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 8 330 - -
Apr6g0587 382 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Apr6g0587 382 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Apr6g0587 382 ProSiteProfiles NAC domain profile. 15 166 IPR003441 GO:0003677|GO:0006355
Apr6g0587 382 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0587 Apr-Chr6 8268938 8271125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0587 1 380 NAC Transcription Factor Family AT5G18270 51.134 6.73e-121 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr6g0587 NAM 2.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0587 - - gmx:100813376 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0587 6 8268938 8271125 Apr6g0587 6 8268938 8271125 ECH