Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0585 ATGTACTATCAGCAGCAGCAGCAAGCTAAGAACATGCATGCTTTGAGGATGCACAGTCCTACTGAGAGGCATATGATGATGCAAGGAGGCAATGGAACAGGTGATTCAGGACTTGTTCTCTCAACTGATGCAAAGCCTAGACTAAAATGGACACCAGATCTTCATGAACGGTTCATAGAAGCAGTTAATCAACTTGGAGGAGCAGACAAAGCTACACCAAAAACAGTATTGAAACTGATGGGAATTCCTGGACTTACTCTTTACCACTTAAAGAGCCATCTACAGAAGTACAGGATCAGTAAAAATATGCATGGACAAACCAACACTGGCAACAATAAAATAGCATCAACCACAGAAGCAGCAGGGAGAATGTTAGAAACAAGTGGAATTCAAATGAAACATTTAAGCATAGGCCTGCAGACAAACAAAAATTCAGAAATAAATGAGGCATTGCAAATGCAAATTGAAGTACAAAGAAGACTACATGAGCAGCTTGAGGTACAGAGACATTTACAACTAAGGATAGAGGCTCAAGGGAAGTACCTTCAGGCAGTGCTAGAAAAAGCTCAAGAGACTCTAGGAAGACAAAATTTAGGTAGTGAGGGTCTTGAAGCTGCCAAGGTTCAACTCTCTGAACTGGCATCAAGAGTATCCTCTCAATGCCTTGACTCTAAATATCAAGAACTGAAAGAATTGCAGGTTTTGTGGCCTCAGCAAACACAAGATGGCCAAGCCACTGATTGTTCAATGGGTAGTTTCTTAGCCTACAGTGAAGAATCTCAAAGAGACCAAGAAACACATAACAAGGGGCTGAACTTGAGAGCCTATAATGGCCTTCCTTTTTCAGTTTCAAAAGAATGTGTAGAAGAGTCTATGCATTTAAAGCCTGATCTCACATTGTGTGAAGAAGTGAAGGAGGATGTCATGTTTCTTTCCTCATCAAGTGATCATAATAAAATAGTAAAGGGAAATTTTTTACCAGAAAGGACTTCAAGCCTCTTATCCATGAATGTAGGAGTTCAAGAAGAAGAAAATTTTGGGACAACTGTTTCAAAGGAAGAAGGATGGAAGGGAAGTGATAGTACTGAAACTAGGAGAGTGCCATTTAAACTGAACCATGAGAAGATTTCTCAAGATTATAGACTTTCTAACTTTGACATGAAACTGGACCTTAATTCCCATGATGACAATGATGCTTCTTCCCACTGCCAACAGTTTGATTTGAATGGTTTCAGCTGGAATTGCTAG 1248 0.399 MYYQQQQQAKNMHALRMHSPTERHMMMQGGNGTGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISKNMHGQTNTGNNKIASTTEAAGRMLETSGIQMKHLSIGLQTNKNSEINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGSEGLEAAKVQLSELASRVSSQCLDSKYQELKELQVLWPQQTQDGQATDCSMGSFLAYSEESQRDQETHNKGLNLRAYNGLPFSVSKECVEESMHLKPDLTLCEEVKEDVMFLSSSSDHNKIVKGNFLPERTSSLLSMNVGVQEEENFGTTVSKEEGWKGSDSTETRRVPFKLNHEKISQDYRLSNFDMKLDLNSHDDNDASSHCQQFDLNGFSWNC* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0585 415 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Apr6g0585 415 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Apr6g0585 415 Coils Coil 148 168 - -
Apr6g0585 415 Gene3D - 44 102 - -
Apr6g0585 415 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 414 - -
Apr6g0585 415 Pfam MYB-CC type transfactor, LHEQLE motif 146 192 IPR025756 -
Apr6g0585 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 414 IPR044848 GO:0003700
Apr6g0585 415 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Apr6g0585 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0585 Apr-Chr6 8208532 8211654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0585 77 414 G2-like Transcription Factor Family AT3G04030 48.968 9.14e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr6g0585 Myb_DNA-binding 4.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0585 - - gmx:100786282 732.25