Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0558 ATGGGTTTCACCAGGTGCAAAAATTTGTTCTCAATGTTCATCCTATTATCATATTGTAATTTATTAGATAATGTTGTTTTTGCCGTAAACACCACCACACCATCATCTCAAATCATCAAAGATCCTGAAACTCTCAGCTCCAATAATGGAAACTTCACCTTGGGGTTCTTCACCCCTGAAAATTCTACAAACCGTTATGTGGCAATTTGGTGCAAATCTCCAGACACTGTTGTGTGGGTAGCCAACAGAAACCAACCCCTTAATGATTCTTCTGGAGTTATAACAACATCTGAGGATGGCAAGCTTGTGGTGTTGAATGGACAGAAAAAGGTGATTTGGTCACCAAATATGTCTTATATTGCATCCAATTCTAGTTTCTATGTTTCAAGTTATGGTAGTCTTGTCTTGGTGGCTGCAACAGGAAACACCATATGGGAGAGTTTCAACCATCCTTCAAATACATTGTTGCCCCATATGAAAATTTCTAGCAACAAAATAACAGGTGAGAAAGTAGAACTTACATCATGGAAAAGCCCTTCTGATCCATCCATTGGAAGCTTCTCTTGTAGTGTTGAACGCTTACAGATTCCTGAAGTGTTAGTTTGGAATGGATCTCAACCATATTGGCGCAGTGGTCCATGGAATGGTCAAGTCTTTATAGGCTTACAACACATGGGAGTATCCTATCTTAATGGTTTTAGTGTTCAAAATGATGTGGATGGAACAGTGGGTATATCTTTTGCAGTAGATGACTTTGGAATCGCAATCTACTCCCTAAATTCGCAAGGACAAATCTTAGAAAAAGATTGGGACGATGAGAAAAAGGAATGGCAAGTTACATGGACAAGTCAAGAATCAGATTGTGATGTTTATGGCAAATGTGGGCCCTTTGCAATCTGTGATTCACAAGGCTCACCAATATGTAGCTGTTTGAAAGGATTTGAACCAAGGAACAAGCAAGAATGGAATAGTCAAAACTGGACTAGTGGATGTGTTAGGAGGACAGATTTGCAATGTGAAATGGTCAAGAATCAAAACACAAGTGAAGATGGTGATAAAGCAGATGGGTTTCTGCAATTACAAATGGTCAAAGTTCCTGATTTAGCACAATTGTCATCTGTTACACAAGACACATGTAGAAGCCAGTGCTTGGAGAATTGCTCTTGCAGTGCATATTCATATGATAATGTTATTGGCTGCATGTCTTGGAATGTGAATCTAGTTGACATACAACAATTCCCAAGTGGGGGAACTGATCTATACATCCGTGTAGCCTCCGCTGAACTTGATAAAGGGCATAACATAAAAGTGATCATTATTATAGTTACTGTGATAATAGGAATTTTCATAATTGTCACATCTGTATGCGTCATTTGGAGAAGGGATTCAAATTCAGCGAGGAAAAACAAGAACCCTGGATTTTTTCGACTTAACAAAGGTCAAACATCTGAAGAATACACAAATGACAATGTAATTGGAGAACTGTCACCAGCTAAGTTACAAGAGCTACTAATATTTAATTTTGAAAAGGTTGCAACTGCCACAAACAACTTCCACCTATCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTGTACAAGGGGAAATTGCAAGATGGTAGGGAAATAGCTGTTAAAAGACTTACCAGATCATCTAGACAAGGGCTAGAAGAATTCGTGAATGAAGTAGTAGTGCTTTCTAAGCTCCAACACCGCAATCTTGTAAGACTTCTAGGCTGCTGTGTTGAAGGAGATGAAAAGATGTTGATATATGAGCTTATGCCGAATAGAAGTTTGGATGCATATGTGTTTGATCCATCCAAAAACAAACTCCTGGATTGGAAAAAGCGCTTTAGCATAATAGAAGGAATAGCTCGAGGATTACTTTATCTTCATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATGTCTTGCTAGATGGAGAACTAAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAGTGAAGATGAAGCCAATACTCAAAGGGTTGTTGGAACATATGGCTATATGTCACCTGAATATGCAATGCAAGGAGTGTTTTCTGACAAATCAGATGTATTTAGCTTTGGAGTTTTGCTAATAGAGCTTGTTAGTGGAAGACGAAACTCAAGCTTTCATGACAGCAACAATGCTCTTACCCTCTTAGGATTGGTCTGGATAAAATGGAGGGAAGACAATATTTCATCTTTAATAGATCCAGAAATATATGATCACAACCTTCATAAGAATATTTTGAGATGCATACATATAGGACTTTTGTGTGTGCAAGAATCTGCAGCAGACAGGCCCTCAATGGCTGCTGTAATTTCTATGCTTAACAGTGAGATTATGGATCTTCCTCCTGCAAGGGAACCTGCATTCATATTGAGGCAAAATATGCTGAGTTCAGTCTCCTCTGAAGAAAGCAATAAACTGTACTCCTTGAACATTGTCAGTATTACAGACGTCCAAGGCAGATAG 2511 0.3879 MGFTRCKNLFSMFILLSYCNLLDNVVFAVNTTTPSSQIIKDPETLSSNNGNFTLGFFTPENSTNRYVAIWCKSPDTVVWVANRNQPLNDSSGVITTSEDGKLVVLNGQKKVIWSPNMSYIASNSSFYVSSYGSLVLVAATGNTIWESFNHPSNTLLPHMKISSNKITGEKVELTSWKSPSDPSIGSFSCSVERLQIPEVLVWNGSQPYWRSGPWNGQVFIGLQHMGVSYLNGFSVQNDVDGTVGISFAVDDFGIAIYSLNSQGQILEKDWDDEKKEWQVTWTSQESDCDVYGKCGPFAICDSQGSPICSCLKGFEPRNKQEWNSQNWTSGCVRRTDLQCEMVKNQNTSEDGDKADGFLQLQMVKVPDLAQLSSVTQDTCRSQCLENCSCSAYSYDNVIGCMSWNVNLVDIQQFPSGGTDLYIRVASAELDKGHNIKVIIIIVTVIIGIFIIVTSVCVIWRRDSNSARKNKNPGFFRLNKGQTSEEYTNDNVIGELSPAKLQELLIFNFEKVATATNNFHLSNKLGQGGFGPVYKGKLQDGREIAVKRLTRSSRQGLEEFVNEVVVLSKLQHRNLVRLLGCCVEGDEKMLIYELMPNRSLDAYVFDPSKNKLLDWKKRFSIIEGIARGLLYLHRDSRLKIIHRDLKASNVLLDGELNPKISDFGMARIFGGSEDEANTQRVVGTYGYMSPEYAMQGVFSDKSDVFSFGVLLIELVSGRRNSSFHDSNNALTLLGLVWIKWREDNISSLIDPEIYDHNLHKNILRCIHIGLLCVQESAADRPSMAAVISMLNSEIMDLPPAREPAFILRQNMLSSVSSEESNKLYSLNIVSITDVQGR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0558 836 Gene3D Phosphorylase Kinase; domain 1 492 593 - -
Apr6g0558 836 ProSiteProfiles Protein kinase domain profile. 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0558 836 ProSiteProfiles PAN/Apple domain profile. 339 425 IPR003609 -
Apr6g0558 836 Gene3D Transferase(Phosphotransferase) domain 1 594 796 - -
Apr6g0558 836 SMART ntp_6 352 424 IPR003609 -
Apr6g0558 836 CDD PAN_AP_plant 335 425 - -
Apr6g0558 836 CDD B_lectin 36 151 IPR001480 -
Apr6g0558 836 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Apr6g0558 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 26 835 - -
Apr6g0558 836 Gene3D - 24 149 IPR036426 -
Apr6g0558 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Apr6g0558 836 SUPERFAMILY Protein kinase-like (PK-like) 501 789 IPR011009 -
Apr6g0558 836 Pfam D-mannose binding lectin 76 177 IPR001480 -
Apr6g0558 836 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Apr6g0558 836 PIRSF SRK 3 836 IPR024171 GO:0004674
Apr6g0558 836 CDD STKc_IRAK 524 790 - -
Apr6g0558 836 SMART blect_4 36 151 IPR001480 -
Apr6g0558 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 182 IPR036426 -
Apr6g0558 836 Pfam Protein tyrosine and serine/threonine kinase 519 788 IPR001245 GO:0004672|GO:0006468
Apr6g0558 836 Pfam PAN-like domain 352 410 IPR003609 -
Apr6g0558 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 835 - -
Apr6g0558 836 SMART serkin_6 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0558 Apr-Chr6 7518197 7522265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0558 427 807 Receptor kinase-like Gene Family AT4G05200 48.953 2.12e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr6g0558 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0558 - - gsj:114424251 1096.65