Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0553 ATGGATTTGACAGCGGAGAAGAAGGAGTCTGAGAACAACAACAACAATAACCCCGAAAGTACTCATCAAACGTTGGATTCTTCTTCTCAATTGGCAGCTGATGCTAACAGCAACAGCAAAGAAGCCGAAGAACGACAAGCCCGTGACCTTAAAGCTGGTCTTCACCCCCTGAAGCACAAATTTGTATTTTGGTACACACGTCGAACGCCCGGAGTTCGAAATCAAACATCGTACGAAGACAACATAAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCTCGTCCTTCTTCTTTGCCTAGTCCAACAGATTTGCACCTTTTCAAGGAAGGAATTCGTCCCTTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCAGGTCGTTTTTGGGAAGACCTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGGGATAACATATGTGGTGCTGTACTGAGCATTCGTTTCAATGAGGATATATTGAGTGTGTGGAATCGCAATGCTTCTGATCATCAGGCTGTAATGGCTCTGAGAGATTCAATTAAACGTCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGATGCCTCTCTGCGAGACAATTCATCTTATAGGAACACTTGGTTGAGAGGCTAA 705 0.4355 MDLTAEKKESENNNNNNPESTHQTLDSSSQLAADANSNSKEAEERQARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0553 234 Coils Coil 25 45 - -
Apr6g0553 234 Pfam Eukaryotic initiation factor 4E 56 214 IPR001040 GO:0003723|GO:0003743|GO:0006413
Apr6g0553 234 Gene3D RNA Cap, Translation Initiation Factor Eif4e 26 227 IPR023398 -
Apr6g0553 234 MobiDBLite consensus disorder prediction 14 37 - -
Apr6g0553 234 MobiDBLite consensus disorder prediction 1 49 - -
Apr6g0553 234 ProSitePatterns Eukaryotic initiation factor 4E signature. 112 135 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Apr6g0553 234 SUPERFAMILY eIF4e-like 46 230 IPR023398 -
Apr6g0553 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 39 234 IPR001040 GO:0003723|GO:0003743|GO:0006413
Apr6g0553 234 PANTHER BNAA10G16710D PROTEIN 39 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0553 Apr-Chr6 7424144 7428340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0553 42 234 Eukaryotic Initiation Factors Gene Family AT5G18110 85.492 1.07e-126 355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0553 6 7424144 7428340 Apr6g0553 6 7424144 7428340 ECH