Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0532 ATGCTTTTTAGCTCTTCTGCTAACTTGCCGATGGGAAATAGGCCCCATTCTTCAGTGCTTTTGCTTTTGGTAACGATTTTACTTTCAATCCATTATTCAGAGCAACTACAATCCTCTCACTCTCAGACCCTTCTGAGAATTCAACAGCTATTGAACTTTCCTGCTGTTTTAAGCAGCTGGAAGAACAACACAGACTTTTGCAGCTCTGATTCATCATCTTCTCTTACTGTTGTATGCTATGAGGGAACCATAACTCAGTTGAACATTGTTGGTGAATCAAGAGCTCTACTTCTCCCTAGAAACTTCTCAATTGATTCCTTTGTCACAACACTGGTCAAGCTTCCCAGTTTGAAAGTCCTCACTTTGGTTTCTCTTGGTATTTGGGGTCCATTGCCTGGTAAAATTGCGCGGTTATCATCACTTGAAATAGTTAACGTGAGTTCAAATTTTCTATATGGTGCCATCCCTCAAGAGTTTCCATTACTGTCACACCTCCAGACACTGATTCTAGATAACAACATGTTTTCTGGCCACCTTCCTGAATGGCTGGATTCCTTTCCAGCCTTAACTGTGTTAAGTTTGAAAAACAACTTGTTCAATGGTTCTCTTCCTGATTCCTTAAGTAATTTGGAAAATATGAGAATTCTTTCACTTTCTCATAACCATTTTTATGGATCAGTACCTGATTTGAGCCGTTTGACAAACCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCGGTTTCCCCGGCTTGGTAACAAATTAGTTACTCTAGTACTCAGAAACAATAACTTCAGGTCTAGTATCCCTGATGATGTGAGCTCATATTATCAGCTGGAGAGATTTGACATCTCAGAAAACACATTTGTTGGGCCATTCCAACTAGGACTGTTATCACTTCCTTCTATCACTTATATGAACATTTCTGGAAACAAATTAACAGGAATGCTTTTTGAGAATCTGTCTTGCAATCCGGGACTTGAAGTAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCGAAATGTTTAGTGTCAAATTCCAATGATAGAACTGTTTTGTATGCTAAAAATTGTCTAGAAGAGACAAATCAAAATCAACATGCACAGCCCTTTTGCCACACTGAAGCCATAGCTGTGGGAATAGTACCTGTGGGAAAGAAGCACAAGCGAGTATCTAAGGCAGTTCTTTCACTTGGGATAGTATGTGGAACCTTTGGAGGATTGGCACTTGTTGCACTGCTTTTCTTTATTATTATTAGAAGAGGAAATGTCAAAAGCAGAATGAAGAATCCTACTACAAAATTAATATCAGAAAATGCAGCTTCTGGATACACCTCTAAGTTACTCTCTGATGCAAGGTATGTATCTCAAACAATGAAGTTCGGAACAGTTGGCCTGCCACCTTATCGACATTTCTCACTGGAAGAGATTGTGGCAGCTACAAACAACTTTGACATGGCTTCTTTTATGGGTGAAGGTTCCCAGGGAAAGATGAACAGAGGTCAACTAAAGGATGGTTCACTTGTCGCCATTAGGAGTGTAAAACTGACCAAAAGCTACAACAGTCAAGATTTTATGCACTACATAGAGCTGATATCCAAATACAGGCATCGTCATTTAGTCAGTGTTCTGGGACACTGCTTTGAAACTTACTTGGATGATTCAAGTGTCAGAAGCATATTTATTGTCTTTGAGTATGTACCAAATGGTACACTCAAGAGCTGGATCTCAGATGGGCACTATAGAAAATCCTTGACCTGGACTCAACGCATAGAAGCTGCAATTGGAGTAGCAAAGGGCATCCAATTTTTGCATACAGGGATTGTCCCTGGTGTATATTCAAACAATCTCAAAATAAAAGATGTTTTACTTGACCAAAATTTTGTTGCAAAAATCAGCAGTTATAACCTGCCTTTGTTATCTAACATGGGAAAGGTTGTGCATAGAAATCCTTCCAGCGGATTCAGAACTCCTAGCTTTAACAAAAGTGTAAAAAATGAAGACAAGTCTGATATTTATGACTTTGGAGTAATACTGCTGGAACTCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGGACACTTTAAAGGATCTGTTGCAAGCAAGCATAACAGGGGATGGCGAAGCTAGGAGAAGCATAATAGATCCTGCAGTTAGCAAGGCATGTTTGGATCAATCATTGAAGACAATGATGGAGATATGTGTGAGGTGTCTGGTTAAAGAGGCAGCAGAGAGGCCCTCTACAGAGGATGTTTTGTGGAATTTGCAGTTTGCTGCTCAAGTGCAAGATGCATGGAGAGGGGACTCTCAAAGTAGTGATGGGTCTCCCATTTCACCTTTATCTTCTCGAAGAATGACCTTCCATTAG 2382 0.3988 MLFSSSANLPMGNRPHSSVLLLLVTILLSIHYSEQLQSSHSQTLLRIQQLLNFPAVLSSWKNNTDFCSSDSSSSLTVVCYEGTITQLNIVGESRALLLPRNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNVSSNFLYGAIPQEFPLLSHLQTLILDNNMFSGHLPEWLDSFPALTVLSLKNNLFNGSLPDSLSNLENMRILSLSHNHFYGSVPDLSRLTNLQVLELDDNAFGPRFPRLGNKLVTLVLRNNNFRSSIPDDVSSYYQLERFDISENTFVGPFQLGLLSLPSITYMNISGNKLTGMLFENLSCNPGLEVVDLSSNLLTGSLPKCLVSNSNDRTVLYAKNCLEETNQNQHAQPFCHTEAIAVGIVPVGKKHKRVSKAVLSLGIVCGTFGGLALVALLFFIIIRRGNVKSRMKNPTTKLISENAASGYTSKLLSDARYVSQTMKFGTVGLPPYRHFSLEEIVAATNNFDMASFMGEGSQGKMNRGQLKDGSLVAIRSVKLTKSYNSQDFMHYIELISKYRHRHLVSVLGHCFETYLDDSSVRSIFIVFEYVPNGTLKSWISDGHYRKSLTWTQRIEAAIGVAKGIQFLHTGIVPGVYSNNLKIKDVLLDQNFVAKISSYNLPLLSNMGKVVHRNPSSGFRTPSFNKSVKNEDKSDIYDFGVILLELILGRTIKSRNVDTLKDLLQASITGDGEARRSIIDPAVSKACLDQSLKTMMEICVRCLVKEAAERPSTEDVLWNLQFAAQVQDAWRGDSQSSDGSPISPLSSRRMTFH* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0532 793 Pfam Protein tyrosine and serine/threonine kinase 492 757 IPR001245 GO:0004672|GO:0006468
Apr6g0532 793 Gene3D Transferase(Phosphotransferase) domain 1 571 777 - -
Apr6g0532 793 Pfam Leucine rich repeat 163 223 IPR001611 GO:0005515
Apr6g0532 793 SUPERFAMILY Protein kinase-like (PK-like) 468 762 IPR011009 -
Apr6g0532 793 SUPERFAMILY L domain-like 90 363 - -
Apr6g0532 793 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 15 781 - -
Apr6g0532 793 Gene3D Ribonuclease Inhibitor 37 251 IPR032675 -
Apr6g0532 793 MobiDBLite consensus disorder prediction 771 793 - -
Apr6g0532 793 Gene3D Phosphorylase Kinase; domain 1 451 570 - -
Apr6g0532 793 Gene3D Ribonuclease Inhibitor 252 373 IPR032675 -
Apr6g0532 793 ProSiteProfiles Protein kinase domain profile. 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0532 793 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 15 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0532 Apr-Chr6 6906579 6913300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0532 53 787 Miscellaneous Gene Families AT3G03770 62.618 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Apr6g0532 PK_Tyr_Ser-Thr 8.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0532 - - gmx:100813207 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0532 6 6906579 6913300 Apr6g0532 6 6906579 6913300 ECH