Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0531 ATGGCTGAGTCACCAGGTGGTGGTAGCGCTTCTGGAACAAGGCGTAGAGGCACTTCTTCAAGGCGCGCCATGGCAGCACTAGCTCAAGAGGAGGCAATGGGGCTTACAACCCCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGTGGGTGCATCTTTGCACCCCACTTTGGTACTGACCAGGGTGCAGCCAAGTTTGCAGCGGTGCACAAGGTGTTTGGGGCTAGCAATGTGTCAAAACTCTTGTCAAATATTCCAGCCAACCAACGCAATGAAGCTGCAGCAACAATATCATATGAGGCTCAGGCAAGGCTTTCTGATCCAGTTTATGGTTGTGTGTCCACCATTTTGGCTTTGCAACAACAGGTGGCATCTTTGCAAGCAGAGGTAGCTATGTTGCAAAATCAGCTGATGAATAATAGGTTTGCATATGCAAATGCTCTTCAGAGCACACAACTTCAACAACCAAACATCAATGCAACAACAATGCAGCCAGCATACTCCAACAATTCAAGTGCTTCAACAAACCTTATGAACATGAGCAACTTCAATAACAACCCTGGGTTTAACCTTGCAATGGACACAGCACCCTCATCTCACAGCTTAGAGCCTCTTCAACTCTCAAGGTTGTCCCAGTATGAGGAAGAGGATGAAGAAGAAAGCAGGACTCATCTAGTCTTCAATCGCCGTCATTGA 702 0.4758 MAESPGGGSASGTRRRGTSSRRAMAALAQEEAMGLTTPCGACKFLRRKCIGGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPANQRNEAAATISYEAQARLSDPVYGCVSTILALQQQVASLQAEVAMLQNQLMNNRFAYANALQSTQLQQPNINATTMQPAYSNNSSASTNLMNMSNFNNNPGFNLAMDTAPSSHSLEPLQLSRLSQYEEEDEEESRTHLVFNRRH* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0531 233 ProSiteProfiles LOB domain profile. 37 139 IPR004883 -
Apr6g0531 233 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 225 - -
Apr6g0531 233 Coils Coil 118 138 - -
Apr6g0531 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 14 225 - -
Apr6g0531 233 MobiDBLite consensus disorder prediction 212 233 - -
Apr6g0531 233 MobiDBLite consensus disorder prediction 1 23 - -
Apr6g0531 233 Pfam Lateral organ boundaries (LOB) domain 38 136 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0531 Apr-Chr6 6901322 6902561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0531 37 223 AS2 family AT3G03760 60.697 1.06e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr6g0531 LOB 8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0531 - - aprc:113866578 409.068