Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0529 ATGGCAGCAGAGTCACTGAGAGTAACCACTTCATCTCTCTGCTATCTCAATGGATCACAGAGGAGACCAACCCCACTCTCTCCGGTTCGCTTCATGGGTTTTCGCCCTCGACCCTCTCACTCTCTATCTTCATCTTCTCTTTCGCACTTCTTTGGGACTTGTCGAATCAACTACAATTCACGCCAACTTGCTCCACGAAAAAGAAACTTCTTTGTTTTCGCCATGTCTGCTGATGACACAAAGCGTGCTGTTCCATTGAAGGATTATCGCAATATTGGCATCATGGCTCACATAGATGCTGGGAAGACTACTACAACCGAACGAATTCTGTATTATACTGGAAGAAACTACAAAATTGGAGAGGTACATGAGGGAACTGCGACGATGGACTGGATGGAGCAAGAGCAGGAAAGAGGCATTACCATTACTTCTGCTGCAACTACTACATTTTGGAATAAGCACCGGATCAACATTATCGATACTCCTGGTCATGTTGACTTTACCTTAGAAGTGGAGCGAGCGCTTAGGGTGTTGGATGGGGCTATATGCTTGTTTGACAGTGTTGCTGGTGTGGAGCCGCAATCAGAAACTGTGTGGAGGCAAGCTGATAAATATGGGGTGCCGCGGATTTGCTTTGTCAATAAAATGGACCGTCTTGGAGCAAACTTTTTTCGAACGAGGGACATGATAGTAACAAATTTGGGTGCTAAACCACTTGTACTGCAGTTACCAATTGGTTCAGAAGATAGATTTAAGGGAGTTATAGACCTTGTTAGGATGAAAGCTATAGTTTGGTCTGGAGAAGAGCTGGGTGCCAAGTTTGATTTTGTAGATATTCCAGCTGATCTTCTAGAGCAGGCTAAGGATTACCGAGCCGAGATGATAGTAAACATAGTTGAGTTCGATGACAAGGCTATGGAGAACTACCTGGAGGGAATTGAACCAGATGAAGAAACTATAAAAAAATTAGTTAGGAAAGGAACCATAGCAGCCAGTTTTGTGCCAGTGTTGTGTGGCTCAGCTTTCAAAAACAAGGGAGTCCAACCATTGCTTGATGCTGTGGTGGATTATTTACCATCACCACTGGACTTGCCACCAATGAAGGGCACTGACCCTGAAAACCCAGAAGCGACAATAGAGAGGATAGCAAGTGATGAAGAACCATTTGCTGGGCTAGCTTTTAAGATCATGAGTGATCCATTTGTAGGCTCACTTACGTTTGTCAGGGTCTATGCTGGGAAGCTAAGTGCAGGGTCCTATGTACTCAATGCAAACAAAGGGAAAAAGGAGAGAATTGGTAGACTTCTAGAAATGCATGCAAACAGCAGAGAGGATGTTAAAACAGCTTTAGCTGGTGATATTATTGCTCTTGCAGGTTTGAAAGATACTATTACAGGTGAAACTTTGTGTGACCCTGATAATCCAATCATGCTTGAGCGGATGGACTTCCCTGATCCTGTGATTAAGGTTGCAATTGAACCCAAAACCAAAGCTGATGTTGACAAGATGGCATCTGGTTTAATCAAGCTTGCACAGGAAGACCCTTCTTTCCACTTCTTCCGTGACGAAGAGATAAACCAGACAGTGATCGAAGGAATGGGAGAATTACATCTTGAAATCATCGTCGATCGACTCAAAAGAGAATTTAAGGTGGATGCTAATGTTGGTGCTCCCCAAGTAAACTACAGGGAAAGCATTTCTAAAACCTCAGAAGTGAAGTATGTGCACAAGAAACAGTCAGGTGGACAAGGTCAGTTTGCAGATATCACTGTACGGTTTGAGCCCATGGATCCAGGTAGTGGATATGAGTTCAAGAGTGAAATCAAAGGAGGTGCTGTACCAAAAGAATACATTCCTGGGGTGATGAAAGGATTGGAGGAGTGTATGAGCAATGGTGTGCTTGCTGGCTTTCCGGTTGTTGATGTACGTGCAGTTCTCGTGGATGGTTCTTACCATGATGTAGATTCAAGTGTGCTGGCATTTCAGTTGGCAGCAAGAGGAGCTTTTAGGGAAGGAATCAGAAAAGCTGGACCAAGGATGCTTGAACCTATAATGAAGGTTGAAGTTGTTACTCCTGAGGAACATCTAGGTGATGTAATTGGCGATCTCAACTCAAGAAGAGGTCAGATAAACAGTTTTGGTGACAAACCTGGGGGTCTAAAGGTGGTTGATGCTCTGGTACCTCTTGCTGAGATGTTCCAATACGTCAGTACACTTAGAGGGATGACAAAGGGCCGTGCATCCTACACAATGCAATTAGCCATGTTTGATGTGGTGCCTCAACACATTCAGAATCAACTTGCCTCAAAAGAGCAAGAAGTTGCAGCATAA 2331 0.4406 MAAESLRVTTSSLCYLNGSQRRPTPLSPVRFMGFRPRPSHSLSSSSLSHFFGTCRINYNSRQLAPRKRNFFVFAMSADDTKRAVPLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWNKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQLPIGSEDRFKGVIDLVRMKAIVWSGEELGAKFDFVDIPADLLEQAKDYRAEMIVNIVEFDDKAMENYLEGIEPDEETIKKLVRKGTIAASFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDLPPMKGTDPENPEATIERIASDEEPFAGLAFKIMSDPFVGSLTFVRVYAGKLSAGSYVLNANKGKKERIGRLLEMHANSREDVKTALAGDIIALAGLKDTITGETLCDPDNPIMLERMDFPDPVIKVAIEPKTKADVDKMASGLIKLAQEDPSFHFFRDEEINQTVIEGMGELHLEIIVDRLKREFKVDANVGAPQVNYRESISKTSEVKYVHKKQSGGQGQFADITVRFEPMDPGSGYEFKSEIKGGAVPKEYIPGVMKGLEECMSNGVLAGFPVVDVRAVLVDGSYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQLASKEQEVAA* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0529 776 Gene3D - 683 754 - -
Apr6g0529 776 Gene3D Elongation Factor G (Translational Gtpase), domain 3 487 563 - -
Apr6g0529 776 SUPERFAMILY EF-G C-terminal domain-like 483 560 IPR035647 -
Apr6g0529 776 SMART EFG_IV_2 559 677 IPR005517 GO:0005525
Apr6g0529 776 CDD EFG_mtEFG1_IV 562 677 IPR005517 GO:0005525
Apr6g0529 776 Pfam Elongation Factor G, domain III 483 556 IPR041095 -
Apr6g0529 776 CDD EFG_III 484 559 IPR009022 -
Apr6g0529 776 Pfam Elongation factor Tu GTP binding domain 88 360 IPR000795 GO:0003924|GO:0005525
Apr6g0529 776 Gene3D - 564 767 IPR014721 -
Apr6g0529 776 SMART EFG_C_a 679 767 IPR000640 -
Apr6g0529 776 CDD EFG_mtEFG_C 682 760 IPR035649 -
Apr6g0529 776 Pfam Elongation factor G, domain IV 558 676 IPR005517 GO:0005525
Apr6g0529 776 CDD EFG_mtEFG_II 389 471 - -
Apr6g0529 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 360 IPR027417 -
Apr6g0529 776 SUPERFAMILY Translation proteins 343 483 IPR009000 -
Apr6g0529 776 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 130 145 IPR031157 -
Apr6g0529 776 Pfam Elongation factor G C-terminus 680 766 IPR000640 -
Apr6g0529 776 Gene3D Translation factors 372 486 - -
Apr6g0529 776 PANTHER RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL 72 769 - -
Apr6g0529 776 TIGRFAM small_GTP: small GTP-binding protein domain 89 259 IPR005225 GO:0005525
Apr6g0529 776 Hamap Elongation factor G [fusA]. 85 771 IPR004540 GO:0003746|GO:0005525|GO:0006414
Apr6g0529 776 CDD EF-G 91 361 - -
Apr6g0529 776 SUPERFAMILY Ribosomal protein S5 domain 2-like 558 678 IPR020568 -
Apr6g0529 776 Gene3D - 80 371 IPR027417 -
Apr6g0529 776 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 72 769 - -
Apr6g0529 776 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 87 362 IPR000795 GO:0003924|GO:0005525
Apr6g0529 776 Hamap Elongation factor G, chloroplastic. 79 776 IPR030848 GO:0003746|GO:0006414|GO:0009507
Apr6g0529 776 TIGRFAM EF-G: translation elongation factor G 82 771 IPR004540 GO:0003746|GO:0005525|GO:0006414
Apr6g0529 776 PRINTS GTP-binding elongation factor signature 91 104 IPR000795 GO:0003924|GO:0005525
Apr6g0529 776 PRINTS GTP-binding elongation factor signature 137 145 IPR000795 GO:0003924|GO:0005525
Apr6g0529 776 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Apr6g0529 776 PRINTS GTP-binding elongation factor signature 173 184 IPR000795 GO:0003924|GO:0005525
Apr6g0529 776 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Apr6g0529 776 Pfam Elongation factor Tu domain 2 403 470 IPR004161 GO:0005525
Apr6g0529 776 SUPERFAMILY EF-G C-terminal domain-like 682 771 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0529 Apr-Chr6 6826669 6832072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0529 664 761 Eukaryotic Initiation Factors Gene Family AT3G22980 31.313 9.36e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0529 K02355 - gmx:102663021 1419.45