Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0524 ATGGCAGCTTTCATCTTTAACTCCAAACTTCAACCAAGAAAACTCACTCTTCTCCTCAACATATCCTTCATTTTCCTCACATTTCTCTTCCTCAAAGCCTATCTCCACCCTTCTAGTTCTAAGATTCATGCCTCCACACGCATCTTCAACCATGCTAGATTGCTCAATGACATCATTGTTGATGGCTGCACTGACCTTCACAAGTACTCAGATTATGACTCCAAATGCTTATATGTCAAATCCCATGTTCACTGTAGGTCAAAAGGGAACATAAACTATCTTCAAATCTTTTACTGCAACTTTGGCCATTCCCCAATTCTGGGTCAAGTACTGCTTGTACTTTGGCTTGGGGTGTTGTTCTATCTTTTGGCTGACACAGCTTCAAATTACTTTTGTGCTTCCTTAGAAGGTTTGTCGGACATCTTGAGACTATCCCCCACCATTGCTGGGGTAACCTTGCTTTCCCTTGGGAATGGTGCTCCTGATTTTTTTGCTAGTGTTGTTTCCTTCACAAGATCCAATGATGGTGCAGTTGGCCTCAATAGCATTCTGGGAGGGGCATTTTTTGTCTCTAGTGCTGTTTTGGGGGTCATAAGTTTTCTTGTTAATCCAAATGAAATTGCAGTTGACAAGGCCAGTTTCATCAGGGATGTCATTTTCTTCCTTTTCTCTTTATTCATCCTTCTTGTCATCATTTCAATTGGTAAAATTAGCTTGTTGGGTTCAATATGTTATGTTTCTATTTACTTCCTTTATGTCTGTGCTGTCTCTGCCACACATTTTATCTATGGAGGGGACAGGCCAGAAGGGGAACTTGCAGCATCTTCTGATGAGTTGGTAGAGTCTGGCATACCCTTGCTAGGTTATGTTGATGATGAGAAACCAGATGTGTCAAATAAAGAGGTTATTGAAGATAAGGGGGAAAAACAAGAGGGTTTTGGTAATGATTCATTTGACTGTAATTACTGGAGCAAGTTTCTACAAGTACTAGAATTACCTCTTAGTTTGCCAAGAAAACTTACTATTCCAGTTGTGAGTGAGGAGGGTTGGTCAAAGCCATATGCTGTTATATCTGTCACATTAGCCCCAGTTTTGTTCACAGCTCTTTGCAATACCCAGATGGAAAATGTGAGTTCAAGAAGTAGTCTTGTTGCATACTTAACAGCTGCTTTAATTGGCATTGTTTTGGGGAACATGGCATGTGTGACCACTAAGAGCACTAGTCCACCCAGAAAGTGCTTGTTTCCTTGGCTAGCAGGGGGCTTTTCTATGAGTGTGACATGGACTTATATCATTGCTGAAGAACTTGTTTCCCTCTTGGTTGCACTTGGGAATATCATAGGTGTTAGTCCTTCAATCCTTGGATTAACTGTCCTAGCTTGGGGTAATTCTCTAGGGGATTTGATAGCCAATGGTGCAATGGCCAAGAATGGTGGAGCAGATGGTGCCCAAATTGCTGTCTCTGGTTGTTATGCTGGTCCTATGTTTAATATTTTAATGGGTTTGGGCTTGCCTCTTGTTCTCTCAGCATGGTCTGAATATCCAGATTCTTATGTCATTCCCAAGGACACTTCACTTTATGGAACACTTTTGTTCCTAATGGGAGGGGTGCTTTGGGCCCTTGTGATAGTGATCAAGAAGGATATGAGACTTGATAGGTCATTGGGAGCTGGGCTCTTGACCATTTATCTCTGCTTTTTGTTCACAAGGATGGCCATGGCAATTGGTGTTATTAGATTCTAA 1743 0.4159 MAAFIFNSKLQPRKLTLLLNISFIFLTFLFLKAYLHPSSSKIHASTRIFNHARLLNDIIVDGCTDLHKYSDYDSKCLYVKSHVHCRSKGNINYLQIFYCNFGHSPILGQVLLVLWLGVLFYLLADTASNYFCASLEGLSDILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSNDGAVGLNSILGGAFFVSSAVLGVISFLVNPNEIAVDKASFIRDVIFFLFSLFILLVIISIGKISLLGSICYVSIYFLYVCAVSATHFIYGGDRPEGELAASSDELVESGIPLLGYVDDEKPDVSNKEVIEDKGEKQEGFGNDSFDCNYWSKFLQVLELPLSLPRKLTIPVVSEEGWSKPYAVISVTLAPVLFTALCNTQMENVSSRSSLVAYLTAALIGIVLGNMACVTTKSTSPPRKCLFPWLAGGFSMSVTWTYIIAEELVSLLVALGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSGCYAGPMFNILMGLGLPLVLSAWSEYPDSYVIPKDTSLYGTLLFLMGGVLWALVIVIKKDMRLDRSLGAGLLTIYLCFLFTRMAMAIGVIRF* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0524 580 Pfam Sodium/calcium exchanger protein 418 570 IPR004837 GO:0016021|GO:0055085
Apr6g0524 580 Pfam Sodium/calcium exchanger protein 114 255 IPR004837 GO:0016021|GO:0055085
Apr6g0524 580 Gene3D - 354 572 IPR044880 -
Apr6g0524 580 Gene3D - 144 276 IPR044880 -
Apr6g0524 580 PANTHER CATION/CALCIUM EXCHANGER 1 5 579 - -
Apr6g0524 580 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 5 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0524 Apr-Chr6 6690801 6692739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0524 61 578 Antiporters AT5G17860 52.381 1.60e-177 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0524 K13754 - gmx:100818583 975.696