Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0523 ATGGCTACCACACTGTGTGTGTCCAAAAGTATGGGATACACCTTGTTCTTGAACTCCTCCTTCCTCGTTGTGATTTGTTCTTTCGTGATTATTCATTTCCACACACAAGAAGTTGTAGTTGTGAGCAAAACCAATGTCTCTGATGGCAGCACTGAAAAAGACTGCAATAACTTAAACAGCCATGGTGACTACAAAGCCAAGTGCTTGAAGCTGAAATTGAATGACCCTTGTGTCTCTCAGGGCTATATTTATTATCTCTACCTTTTCTATTGCAATTTTGGGAGATTCCCTTCATTGGGTTACACCCTTTTATTTCTTTGGCTCTTAGTTCTTTTTTATCTGTTGGCTAATACAACTTCTGAATACTTTTGTCCCTCCCTTGAGAACCTATCCAAATTACTGAGGTTGTCCCCTACCATTGCTGGAGTCACCCTTCTGTCTCTTGGTAATGGTGCTTGTGACGTTTTCTCAAGCCTTGTCTCTTTCCAGGGAAGTGGGACCCGCAGCATTGGCTTTAACACGGTTCTTGGGGGTGTTTCTTTTGTGTCTTGTGTTGTGGTGGGGACTGTAACCATTGCAATACGTCAAAGAGGGGTTCAAGTTATTAAGTCTGCGTTTGTGAGAGACGTTTGTTTTCTTCTTTTGGTTCTTCTGGCCTTGTTTGGTATTTTGATCAATGGTAAGATCAATGTTATTGGAGCTATTGGTTTTACTTTGTTGTATGTGGTGTATGTAATTATTGTTTATATCTCTTCTACACGGTGGAAGGAAGGTGGTGGTGGTGGTGGTGGTGATGATGCTGAAAGGGGTGGTATTGGTATTTCAAGTTATGGCAATGATTTGAGTGTGCCTCTTCTTAGTGGTGTGAGGAAAGGACCAATTGATTGTGTTGAAAATGGTGGTCCAGAATATGGCCTGAATATCAAGAAGCATTGTTGTTGTGTGAGATCTTCAATTTGTGGAATGTTACTTTATGTTCTGGAGATGCCCCTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTGAGTGAAGAAAAATGGTCAAAGGTGTATGCAGTTTTTTCAGTGATATTAGCACCACTTCTCTTGTCAGTCCTGTGGAGTCCTTACAGTGGAAACAGTTTCTTCAGCAAGAATCTTATTGTTGATGGAATTGGATTATTGATTGGGATAATATTTGGTGTGACTGCATTTTTCACAACTGAAATGTCAAGGCCACCAAAGCAGTGCTTATTTCCTTGGCTTGCAGGGGGTTTTATAATGAGTGTGACTTGGAGTTACATTATAGCTCAAGAGTTAGTGGGGTTGCTGGTTTCAATTGGCTACATTTGTGGAATAAATCCTTCAATACTTGGGTTAACAGTTCTTGCCTGGGGGAACTCACTTGGGGATTTGATGACAAATTTAACAATGGCTCTAAATGGTGGGCCAGAGGGTGCTCAAGTAGCAATATCAGGTTGCTATGCTGGTCCTATCTTCAATACCCTCATTGGTTTGGGCTTGTCTCTTGTAACTTCTACATGGTCAGAGTACCCTCAACCTGTTTTGATCCCCAGAGATCCATATCTCTGGGAGACAATGGTATTTTTGGTGGTTGGATTAGTTTGGGCACTTGTGGTTTTGGTAAGAAGAAATATGAAACTTGATGGACTCTTAGGAGGAGGGCTTTTAGTTGTTTACTTCATTTCTCTTTTTCTAAGGCTGATTCAGACAACAGGGTCTCTCCAATAG 1731 0.4119 MATTLCVSKSMGYTLFLNSSFLVVICSFVIIHFHTQEVVVVSKTNVSDGSTEKDCNNLNSHGDYKAKCLKLKLNDPCVSQGYIYYLYLFYCNFGRFPSLGYTLLFLWLLVLFYLLANTTSEYFCPSLENLSKLLRLSPTIAGVTLLSLGNGACDVFSSLVSFQGSGTRSIGFNTVLGGVSFVSCVVVGTVTIAIRQRGVQVIKSAFVRDVCFLLLVLLALFGILINGKINVIGAIGFTLLYVVYVIIVYISSTRWKEGGGGGGGDDAERGGIGISSYGNDLSVPLLSGVRKGPIDCVENGGPEYGLNIKKHCCCVRSSICGMLLYVLEMPLYLPRRLTIPVVSEEKWSKVYAVFSVILAPLLLSVLWSPYSGNSFFSKNLIVDGIGLLIGIIFGVTAFFTTEMSRPPKQCLFPWLAGGFIMSVTWSYIIAQELVGLLVSIGYICGINPSILGLTVLAWGNSLGDLMTNLTMALNGGPEGAQVAISGCYAGPIFNTLIGLGLSLVTSTWSEYPQPVLIPRDPYLWETMVFLVVGLVWALVVLVRRNMKLDGLLGGGLLVVYFISLFLRLIQTTGSLQ* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0523 576 Pfam Sodium/calcium exchanger protein 415 567 IPR004837 GO:0016021|GO:0055085
Apr6g0523 576 Pfam Sodium/calcium exchanger protein 105 249 IPR004837 GO:0016021|GO:0055085
Apr6g0523 576 Gene3D - 348 568 IPR044880 -
Apr6g0523 576 Gene3D - 136 272 IPR044880 -
Apr6g0523 576 PANTHER CATION CALCIUM EXCHANGER 1 576 - -
Apr6g0523 576 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0523 Apr-Chr6 6683626 6685881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0523 16 576 Antiporters AT5G17850 51.675 2.13e-159 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0523 K13754 - gmx:100813848 818.535