Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0516 ATGAAGAACACCATCATTCTAATCTTCTTCTGCTTTGTCCTTCCGTTCACATTTGCTGATCTACGTGATGGCTTCTATAGCTTAACCTGTCCTAAAGCAGAGACAATTGTTCATGAAGTTGTGCAAAGGCGTTTCAACCAGGATAGATCCATTGTCGCAGCCTTTCTTCGCATGCACTTTCATGATTGCTTTGTTAGAGGTTGTGATGCCTCAATATTAATAGATCCAACCAGCACTAGGACATCAGAGAAAAATGCAGGACCAAACCGAACCGTTCGTGGATACGATGTAATTGATGAAGCGAAAACACTCTTAGAACAAGAGTGCCCTTCAACAGTTTCATGTGCTGACATCATAACACTTGCCACTAGAGATGCCGTGGCACTGGCAGGAGGAATCAGGTACAGCGTGCCCACGGGAAGAAGAGATGGTCTACTATCCGACCCCTCACAAGTCAACCTTCCAGCACCATCACTCTCCGTGTCACGGGCTCTTCAATTTTTCACCGCAAAAGGGTTAACACTTGAGGACATGGTGACCCTTTTGGGAGGACACACGGTTGGTTTTGCTCACTGTAGTGTCTTTCAAAATAGGCTTTCAAGTTTTAAAGGGACACTTGATCCCACAATGGACCCTGATTTGGATGCAAAGTTGGTGCAAATCTGTGGGTCACTCAATAAGCCACCAAAAGGTGACCCTCTTGTGTTTTTGGACCAAAATTCACCGTTTAAATTTGATAGTGAATTTTACGACCAAATGCTTCGAAAGAGAGGGGTGCTTCATATTGATCAGGAACTAGCTTTGGACCCTTTGTCAAAAGACATGGTGGCTAATTTTGCGGCTGATGGTAATAGCTTTCAACAGAAATTTGCAAATGCTATGATAAAGATGGGGAACATTGGTGTTTTGGTTGGGAGTGAGGGTGAGATCAGGAAGAATTGCAGGGAGTTTAATTTTCCTTTGTAG 966 0.4379 MKNTIILIFFCFVLPFTFADLRDGFYSLTCPKAETIVHEVVQRRFNQDRSIVAAFLRMHFHDCFVRGCDASILIDPTSTRTSEKNAGPNRTVRGYDVIDEAKTLLEQECPSTVSCADIITLATRDAVALAGGIRYSVPTGRRDGLLSDPSQVNLPAPSLSVSRALQFFTAKGLTLEDMVTLLGGHTVGFAHCSVFQNRLSSFKGTLDPTMDPDLDAKLVQICGSLNKPPKGDPLVFLDQNSPFKFDSEFYDQMLRKRGVLHIDQELALDPLSKDMVANFAADGNSFQQKFANAMIKMGNIGVLVGSEGEIRKNCREFNFPL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0516 321 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Apr6g0516 321 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 PANTHER PEROXIDASE 44-RELATED 11 316 - -
Apr6g0516 321 ProSiteProfiles Plant heme peroxidase family profile. 20 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 Gene3D - 24 318 - -
Apr6g0516 321 CDD secretory_peroxidase 21 315 IPR033905 GO:0004601|GO:0042744
Apr6g0516 321 Pfam Peroxidase 38 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Apr6g0516 321 PANTHER PEROXIDASE 25-RELATED 11 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0516 321 Gene3D Peroxidase, domain 2 155 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0516 Apr-Chr6 6366829 6368081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0516 4 318 Peroxidase AT4G26010 56.329 8.92e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0516 K00430 - gmx:100816459 499.59