Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0514 ATGGAAGATCACCAGGGGCAACAACAGCAACAACAAGACCCAAATAATAGTCCAAACCAACAACAAAGCTCAGAGAAGAGTGAACCCGTGAGGTCTCGATGGACTCCAAAGCCTGAACAAATTCTCATACTTGAATCCATCTTCAATAGTGGCATGGTGAACCCCCCAAAAGATGAAACCGTTAGAATAAGGAAGCTACTTGAGAAATTTGGAACCGTTGGTGATGCCAATGTGTTCTATTGGTTCCAAAACCGCCGCTCGCGGTCACGCCGCCGTCAACGGCAGATTCAGGCGACCCTTAATCAAGTTGGTGGTGCAAATCACAATCCATTTCATCATCATCATCATCAAAATAACCCTTCTGTTGTTGCAAACATGGGTCTTGGTGGTGTTAGTAATTCCTCTTTTGCTAACTCTTATGTCTCTGGTTCCTCTTCTTCATGTGGCGGTGGTAGCGGTGGTAATGGCGGCGAAGAAGGGTTGGGTGGTTTATTTCTACCCTCTACTCAAATGGAATTCCCTGAAATTGATCATCATGCTTCAGCTACATCGTCACAAGTTTTGTATCCTTCTGATGCTCCAAATATGAACTACCAATCTGGATTTGGGGGGATTTCAGGATTCATCACAGTGTTTATCAATGGGGTTGCAACAGAAGTTCCAAGGGGCCCAATGGACATCAAAACAGTGTTTGGTGAAGATGTAATGTTAGTTCATTCCTCTGGAGTGTCAGTTCCCACCAATGAGTTTGGCTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGATGCAACTGGTGTACAACTGCCTCTTTGGCTGTTACATGGCAATTCTAGCTGCGGATGGTGACCTCCCTCCATCACTTAATGGTGACCAGACATAA 891 0.4512 MEDHQGQQQQQQDPNNSPNQQQSSEKSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQIQATLNQVGGANHNPFHHHHHQNNPSVVANMGLGGVSNSSFANSYVSGSSSSCGGGSGGNGGEEGLGGLFLPSTQMEFPEIDHHASATSSQVLYPSDAPNMNYQSGFGGISGFITVFINGVATEVPRGPMDIKTVFGEDVMLVHSSGVSVPTNEFGFLMQSLQHGESYFLMQLVYNCLFGCYMAILAADGDLPPSLNGDQT* 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0514 296 ProSiteProfiles 'Homeobox' domain profile. 27 92 IPR001356 GO:0003677
Apr6g0514 296 SUPERFAMILY Homeodomain-like 25 98 IPR009057 -
Apr6g0514 296 MobiDBLite consensus disorder prediction 1 36 - -
Apr6g0514 296 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 267 IPR044558 GO:0003700|GO:0048830
Apr6g0514 296 SMART HOX_1 29 96 IPR001356 GO:0003677
Apr6g0514 296 Gene3D - 31 98 - -
Apr6g0514 296 MobiDBLite consensus disorder prediction 7 29 - -
Apr6g0514 296 Pfam Homeodomain 31 91 IPR001356 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr6g0514 Apr-Chr6 6283967 6290803 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0514 1 279 Wox Gene Family AT3G03660 51.000 2.04e-72 223
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr6g0514 Homeodomain 1.2e-12 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0514 - - aprc:113866574 501.13
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0514 6 6283967 6290803 Apr6g0514 6 6283967 6290803 ECH