Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0461 ATGTTCCAAGTTGATACATTGAGGTGTTCTTGTTGCCTTTGTTTTTGGGTTCTTTCATGGTTTTTGTTAATCCCAAACACTCATGGATTACAAGCAGCTCAGACCCAAGCCTTGTTGCAGTTAAGGATTTATCTGGAGTACCCAGAATCTTTGCAAATTTGGGAGAATTACAATGGGGACCTGTGTTTCCTTTCTTCATCTGCAAACATGAGCATTAAATGTGAAGATGATGAAGTAACTGAGCTTAAAATCATGGGTGAAAAATCTGTGAAGCCATCATGGTTCAATGGATTTGCAGTTCCCAATCAGACACTATCTGTGAATTTCTCTATCGATTCCTTTTTCACTACGTTGACTAGGTTGACCAGCTTAAGGGTTCTAAGCTTGGTGTCATTGGGGATTTGGGGGCCACTCCCTGATAAGATTCACCGTTTATCTTTGCTTCAAGTTTTGGACTTGAGCTCGAATTTCATGTTTGGTGCCATCCCACCAAAAATATCCACAATGGTAAAGCTTCATGGACTTACACTTGATGACAATTATTTTAATACCACTATGCCTGATTGGTTTGATTCATTGCCTAATCTAAGTATCTTGAGTTTGAAGAGCAATAGTTTAAAGGGTTCATTCCCCTCCTCACTGTGCAAAATTAGGACACTTGAAGTTATTTCCTTGTCCCACAATGAGCTGTCTGGGGAATTGCCTGGTCTCAGTTCTCTCACTGGCCTACATGTTTTGGATTTAAGAGAGAACCATTTAGAATCTGAGCTACCATTGTTGCCTAAAGCAGTTGTCACTGTTCTTCTTAGCAATAACTCATTATCAGGAGAGATACCTAAACAGTTTGGTAAATTGGATCAGCTTCAACATCTAGATCTTTCATCTAATCATCTCTGTAAGATACCACCATCTACCTTGTTCTCTTTACCAAAAATCAGTTATTTGAATCTGGCAAGCAATGTGCTAAGTGGGGTTTTTCCAGACAAACTTAGTTGTGGTAGCAAACTTGGGTTTGTGGATATTTCTAGCAACAAGTTACATGGTGAACTTCCTTCTTGCTTGGCCAATACTTCTGATAGCAGAGTTGTCAGATATGCTGGAAACTGTTTATCTGTGGATGATTCTCAGGGCCAGCATAGAGGGTCTTATTGTAAAGAATCTAGCTCAGGATGGAAGAACTTTAAGGCGTGGAAAGTAGCTGCAGTAGTGGCCATCACTGTTGGACTTGTTCTTGTGCTTTTGGTGTCTGGAGTTTTCTTATGGAAAAAATGCCATTCTAGAAACACAACTGGGAAAGATGTGTTGCTAAAGATTGTCCAAGATAACTCCACAACTGGGGTTTCCTCTGAACTACTTGCAAATGCCAGATTCATTTCTCAAACAGTGAAACTAGGGACACAAACTACTCCAACCTGTCGACAATTTTCAATAGATGAATTAAAGGAAGCCACAAAAAACTTTGACTCGTCAACTTTTATTGGTGAAGGCTCCAGTGGGAAGCTGTACAAAGGTAAACTAGAGAACGGATCCTACGTGGCAATACGATCTTTGGCTCTATCCAAGAAATGCTCAATTCAAAATCTCAAAGCCAGATTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTAGCCTTTTAGGCCATTGTATTGATGGTGGTGGACAAGATGACTCCAATACTCACGAACTTCATCTTATATATGAGTATGTACCAAATGGGAATTATCGTACCCATCTGTCAGAATTTTCTGCAGAGAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCGAAGGCGGTGCATTTCTTACACACTGGAGTTATACCTGGCTGTTTTAGCAACCAACTAAAGACAAATAATGTCTTACTTGATGAGCACGGCATTCCAAAACTAAGTGACTATGGTATGTCCATCATCACGGAAGAAATTGAAAAGCTTGAGGCAAAGGGTGAAAAGCCAAAATCACGCCTAAGGCCAAAAGCGGAGGACGATGTTTATAATTTTGGATTCATATTGTTTGAATCACTTGTTGGACCAATAGCATGTGACAAAGGTGAAACAATTTTCCTACATGAAAAGGCATCCTTTGGCAGTCAAGATGGTAGAAGAAAGATTGTGGACCCATTAGTGTTGACCACTTGCTCTCAAGAGTCATTATCAATTGCAATATCAATAACAACCAAATGCATATCTCCAGAATCTTCATCTCGTCCCTCTTTTGAGGATGTCCTATGGAACTTACAGTATGCAGCTCAAGTTCAAGCCACATCAGAAGCAGACCAGAAATCAGATTCTATATAG 2316 0.3981 MFQVDTLRCSCCLCFWVLSWFLLIPNTHGLQAAQTQALLQLRIYLEYPESLQIWENYNGDLCFLSSSANMSIKCEDDEVTELKIMGEKSVKPSWFNGFAVPNQTLSVNFSIDSFFTTLTRLTSLRVLSLVSLGIWGPLPDKIHRLSLLQVLDLSSNFMFGAIPPKISTMVKLHGLTLDDNYFNTTMPDWFDSLPNLSILSLKSNSLKGSFPSSLCKIRTLEVISLSHNELSGELPGLSSLTGLHVLDLRENHLESELPLLPKAVVTVLLSNNSLSGEIPKQFGKLDQLQHLDLSSNHLCKIPPSTLFSLPKISYLNLASNVLSGVFPDKLSCGSKLGFVDISSNKLHGELPSCLANTSDSRVVRYAGNCLSVDDSQGQHRGSYCKESSSGWKNFKAWKVAAVVAITVGLVLVLLVSGVFLWKKCHSRNTTGKDVLLKIVQDNSTTGVSSELLANARFISQTVKLGTQTTPTCRQFSIDELKEATKNFDSSTFIGEGSSGKLYKGKLENGSYVAIRSLALSKKCSIQNLKARLDLLSKLQHPNLVSLLGHCIDGGGQDDSNTHELHLIYEYVPNGNYRTHLSEFSAEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTNNVLLDEHGIPKLSDYGMSIITEEIEKLEAKGEKPKSRLRPKAEDDVYNFGFILFESLVGPIACDKGETIFLHEKASFGSQDGRRKIVDPLVLTTCSQESLSIAISITTKCISPESSSRPSFEDVLWNLQYAAQVQATSEADQKSDSI* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0461 771 Gene3D Transferase(Phosphotransferase) domain 1 571 770 - -
Apr6g0461 771 Gene3D Ribonuclease Inhibitor 264 388 IPR032675 -
Apr6g0461 771 SUPERFAMILY Protein kinase-like (PK-like) 467 752 IPR011009 -
Apr6g0461 771 Gene3D Ribonuclease Inhibitor 31 263 IPR032675 -
Apr6g0461 771 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 5 769 - -
Apr6g0461 771 SMART LRR_typ_2 240 263 IPR003591 -
Apr6g0461 771 SMART LRR_typ_2 285 308 IPR003591 -
Apr6g0461 771 SMART LRR_typ_2 193 217 IPR003591 -
Apr6g0461 771 SMART LRR_typ_2 145 169 IPR003591 -
Apr6g0461 771 Pfam Protein tyrosine and serine/threonine kinase 492 749 IPR001245 GO:0004672|GO:0006468
Apr6g0461 771 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Apr6g0461 771 PANTHER OS07G0166700 PROTEIN 5 769 IPR045272 GO:0004714|GO:0006468
Apr6g0461 771 ProSiteProfiles Protein kinase domain profile. 487 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0461 771 SUPERFAMILY L domain-like 104 370 - -
Apr6g0461 771 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Apr6g0461 771 Pfam Leucine rich repeat 288 346 IPR001611 GO:0005515
Apr6g0461 771 ProSiteProfiles Leucine-rich repeat profile. 287 308 IPR001611 GO:0005515
Apr6g0461 771 Gene3D Phosphorylase Kinase; domain 1 449 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0461 Apr-Chr6 5401826 5407777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0461 18 700 Miscellaneous Gene Families AT5G14210 58.092 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Apr6g0461 PK_Tyr_Ser-Thr 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0461 - - gmx:100780663 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0461 6 5401826 5407777 Apr6g0461 6 5401826 5407777 ECH