Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0454 ATGGAGGACGGAACAAGCTTCTCCTCATCCAACATTGATCCAAGGAGCGGTTTCCACCATGCTTCCAGAACCTTCCACAGCCTTAGACCCCCACTCCACCTCCCTCCTCCAAACGCCACCGTTTCCGCCGCAGCATACACCATCTCCCTCCGCCGCAACTCGCCCTGGCCGGACTCAGTCACCGCCCTCATCGACTCAGCCACCGGACACCGCCTCTCCTACGCTGAGTTCATCCACCACGTCGAAACCCTAGCTTCCAACCTCACCTCCATCCTCAAACTCTCCAAAGGCGACACTGCCTTAGTTCTCTCCCACAACCTCATGCAGGTTCCGATCCTCTGCTTAGCACTCCTCTCCATTGGCGTAATAGTCTCTCCAGCGAACCCACTCTCCACGCGCTCCGACCTCACGCGCGTCTTCCACCTCAGCAAACCGGTAATTATCTTCGCCGCCACTTCAGTCGCAGCCAAGACTCACGAGCTTCCGAATCTCCGACTCGGAACCGTCTTCCTCGACTCACCCGAGTTTGACTCGCTAATGAGGACGAGGAAAACGAGTGGACTCGAAGCTCGCGTAAAAGTGAGTCAATCTGACGTGGCAGCGATTCTGTACTCGTCTGGGACCACTGGAAATGTGAAGGGAGTAATGCTGACGCACCGTAATTTAACGGCGTTAGCCGTGGGATACGATGCCGTTCGAGAGGAGCGAAAGGAGCCACCGGTGTTCCTCTATACGATGCCCTTTTTCCACGTGTACGGATTCACGTTCAGCTTGAGGGCTATGGTTCTGTCGGAGACGGTGGTGATCATGGAGAGGTTTCGTTTTAGGGAGATGCTGAGGGCGGTGGAGAGGTTCCGAGTGACGAATATCGCGATGGTGCCGCCGCTAGTGGTGGCTTTGACGAAGGACGGCGTAACCGACGGGTACGATTTAACGTCATTGGTAGGAATCGCATGCGGCGCGGCTCCATTGGGAAAGGAAACTGCTGAGGCTTTCAAATCGAAGTTTCCCGGAGTGGTGATCATCCAGGGATACGGTTTAACTGAGTCAACTGCTGGGGTTGCCCGAAGCACCAACGAGGAGATTGACCGGGTGGGAACAACAGGTAGACTATCAGCAGATGTAGAAGCCAAAATTGTGAACCCAAACACAGGAGAAGCCATGCTTCCTGGTCAACAAGGGGAACTCTGGATCAGAGGACCTACCATTATGAAAGGGTATGCTGGTGACCCAGAAGCAACTTCAGCAACTTTGGTGGACGGGTGGTTAAGGACAGGGGACCTCTGTTTCTTCGATGATGAGGGTTTCTTGTACGTTGTAGACAGGTTAAAAGAGTTAATCAAATACAAGGGCTACCAGGTTGCTCCCGCAGAACTAGAACAGTTACTCCACTCTCACCCAGAGATCAAGGATGCCGCAGTTATTCCATACCCTGATGAAGAAGCCGGCCAGGTGCCCATGGCATTTGTGGTAAGACAACCCCAAAGTTCCCTTGGCCAAGCAGAAATAATTAATTTTGTCGCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTTATCGATTCCATTCCGAAGAATGCTGCGGGAAAGATTCTGAGGAAGAACTTGCATAAACTTGCTCTCCAAACATCTTACCCTAGATTATAG 1656 0.526 MEDGTSFSSSNIDPRSGFHHASRTFHSLRPPLHLPPPNATVSAAAYTISLRRNSPWPDSVTALIDSATGHRLSYAEFIHHVETLASNLTSILKLSKGDTALVLSHNLMQVPILCLALLSIGVIVSPANPLSTRSDLTRVFHLSKPVIIFAATSVAAKTHELPNLRLGTVFLDSPEFDSLMRTRKTSGLEARVKVSQSDVAAILYSSGTTGNVKGVMLTHRNLTALAVGYDAVREERKEPPVFLYTMPFFHVYGFTFSLRAMVLSETVVIMERFRFREMLRAVERFRVTNIAMVPPLVVALTKDGVTDGYDLTSLVGIACGAAPLGKETAEAFKSKFPGVVIIQGYGLTESTAGVARSTNEEIDRVGTTGRLSADVEAKIVNPNTGEAMLPGQQGELWIRGPTIMKGYAGDPEATSATLVDGWLRTGDLCFFDDEGFLYVVDRLKELIKYKGYQVAPAELEQLLHSHPEIKDAAVIPYPDEEAGQVPMAFVVRQPQSSLGQAEIINFVAKQVAPYKKIRRVAFIDSIPKNAAGKILRKNLHKLALQTSYPRL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0454 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Apr6g0454 551 Gene3D - 445 547 IPR045851 -
Apr6g0454 551 Gene3D - 34 444 IPR042099 -
Apr6g0454 551 Pfam AMP-binding enzyme 59 449 IPR000873 -
Apr6g0454 551 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 544 - -
Apr6g0454 551 SUPERFAMILY Acetyl-CoA synthetase-like 61 545 - -
Apr6g0454 551 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Apr6g0454 551 CDD 4CL 53 539 - -
Apr6g0454 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0454 Apr-Chr6 5314641 5327946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0454 12 551 Monolignol Biosynthesis Gene Families AT5G63380 50.987 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0454 - - gmx:100801143 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0454 6 5314641 5327946 Apr6g0454 6 5314641 5327946 ECH