Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0427 ATGGCTTCTTATTCTTGTTCAACTTCCGTGCTTGTGCTTCTCTTGGCCATTTTATCTACTCTTCTATGTTTCTCTGTGGCTTCCAATTTCCAAGTTGGTGGCTCAAATGGGTGGCTTGTCCCACCTTCCAATGACACCAACATCTACAATGATTGGGCTTCCCACAACAGGTTCCACGTTGGTGACACCATAAGGTTTAAGTATGAGAAGGACTCCGTGATGGAGGTGGGTGAAGGAGATTACAAGCTTTGCAATGCAACACACCCCACATTCTTCTCCAACAATGGCAACACAGTGTTCAAGTTTGAGCACTCAGGGACTTTCTACTTCATCAGTGGTGCATCAGGGCACTGTAAGAAGGGACAGAAGATGATTGTGAGGGTGATGGAAGATGAGTCTCTTCCTCAGCATGCCAAGTCTTCAGGGTACCATGTTCATGTTTCACCAATTGTGGTCTCTCAAATGCTCCTTCTTCAGTTTGTTTTGGCATGTGTTGCTTCCTATGTCATTTGA 513 0.4522 MASYSCSTSVLVLLLAILSTLLCFSVASNFQVGGSNGWLVPPSNDTNIYNDWASHNRFHVGDTIRFKYEKDSVMEVGEGDYKLCNATHPTFFSNNGNTVFKFEHSGTFYFISGASGHCKKGQKMIVRVMEDESLPQHAKSSGYHVHVSPIVVSQMLLLQFVLACVASYVI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0427 170 CDD OsENODL1_like 29 129 IPR041846 -
Apr6g0427 170 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Apr6g0427 170 PANTHER BLUE COPPER PROTEIN 9 135 IPR039391 GO:0009055
Apr6g0427 170 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Apr6g0427 170 PANTHER EARLY NODULIN-LIKE PROTEIN 21 9 135 - -
Apr6g0427 170 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
Apr6g0427 170 Gene3D - 26 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0427 Apr-Chr6 4946113 4947140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0427 12 132 Phytocyanin Superfamily AT1G48940 55.645 1.96e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0427 - - gmx:100815728 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0427 6 4946113 4947140 Apr6g0427 6 4946113 4947140 ECH