Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0398 ATGAATGATACTAGTGGAAAGGGTTCTTCTTGTTTGGTGTTGACGGAGAAGAAGAAGAATCAAAGTCTTGGTGGTTGCATTGGTATTTTCTTTCAGTTCTTTGGTTGGAACAAAAGACTCACTAAGAAGAGGTTCTTCTCAAAGAAACTTTTGCCTCCTGCTCATGCAAAAGAAGCTTCTTCAAACACGTTTAAAGGAGATGAGAAAATGCCAAATTCTAAGCTTCACTTGATTGCTAGTGAGAACAATGGAGGTTTCCCGAGTGCCAAAAAAGGTGGGAATGGTGGTGTGGAGGCAGAACAGAAGCATGAAAAGACAGTTCCGGGTCTGGTTGCAAGGTTGATGGGTCTAGAATCTATGCCACCTTTACAGCAAGATAAGTCCTTGGAATTTTCATTTTCTGATTCTTGCGGTGATGAACCTAATAATGAAGAGGTGGATTTGGAAATAGTTTTTGCAAATTCAAAAAAGCATGATTCATCAAGACCTCGGAAGATTCAGAAAACGGGAAAGCATGAGAGAAGGATAGTAGTGACGAGGTTTGGATCTGAGGCATTGCAAATTAAGAAAGTTTTGTCACGAGCTAGAAAGTATAACGATCACCGTCAACACAAACTTGTTTCTCCTTTGAAGAGTCCTAGAATAGCTTCTAGAAAGAGCGCATCTCGGCGCTCTAGGCTTATAGGAGCAGCTACTAAGATCCTGGAACCTGGATTGCAGGCCACAAGCAGAGCCAAATGTTCTCTTCCATCTTCCACTTCCATTAATTATAGCATTGTGACAGAAAGGGTAGGAACTAGGCCATTAGATGTGAAATATCAATGTGGTTATGATGACAGCACAGGTAAGTCTTTGATGGGACATGCTTATTGCAGAAGTTGTGGTAATTTGCTTGATGCTGTTGATTACAGGCCTGAGGTTGAGGGACAGCAAGTTGTGTTCACTTCCTCTTTGGAGAAAGCAAAGTCATTTATCCCCTCTCATGAAAATGATGTTGTTCTCTTGAGAAGCAACTCAAGCAAGGAGAAGCTCATAACTCTTGTTAATGAAGATAAAAATAATGTGCAGTATTGTAATGAATCCTCTACCAGAAGAATGTCTTTTCTTGCCGATAGGGATTCATCATGTCAACCATGTGGAACCCTTGATGACAATGACGAGGAGGAGGCATCTTCTTGTTCCTTCAAATGCAAAACTCAAACACAAGTACAGGCATTAAGCCGTGAAAAAATTTCATATGGATCAAGAGTAAGTAATGTGCAAGTGAAGAGAGTATCATCAGCTGCCAGTGCTGTGAGAGGGACTAAAGACTTAGTTACTTTGAATAGAAGCCTAAGTGGTAGAACTAGCATGAGGTCTCCAACCGAAGTGGATAGTTCCAAATTTGATCTAGAGAGAAAACCTCCTAAGAGATATGATTCCTCGTCTCCTGTAAGAACCTTTGAGAGGAAAATGACCCCAAATGTATCACAAGTTGGAGGCACAGCTTCCAGTAATTTGGTTACAGTGAAACAAGGAAATGTTAGTTCTGGTGCAAGGGGAGGTACAATAAGGGGTTTTGATGCTTCCTCTCGAAACAGTTCTAATGCCAAAAGTAAACAAGATGGTCAGCGAAATACATATAAGGTTGATGAAAATAAGGTCAATGAGGTTGTTTCGTTTACCTTTAATTCCCCTTTTAAGCAAAAGATAATAATACCCGGTGAAAAGGGAGACACAAGCAGTGATAATGTCATTACGACTTGTTTCCAAAGACCTCCACCCTTAACATCAGATGCTTTTGGTTCCTTTCTAGAACAGAAGTTGAAGGAATTAAGCACTCAAGAAAATGAGTTGGACACTGATGGTCCATCGAAAAAATCAATTACCATGATTCTTCAAGAACTGTTAACTGTGCTTAATTCAAGGCATCTAACTTGTTCCAATGATCATATATCCAATGACAAGTATAGGGAAAATCATGGAATGTTATTAGGAACCTCTTGCAGTGATAATCATCTCAGTCCTGGATCAGTTCTTGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCACGGTTTTCACCTTCACTACTATATGAATTGCTCATACGATCAACTGGAACAGTTGGAACATGATATTGAACTTTTAGATTCTGCAACTTCATTCAACAAAGGGAAGAAAGGTTATGAGATACTGACTGAACTTATCAACCAAGTCCCTAGGATATTGCAAAGTTTAAATTCTTTTAGGATAGGATTGACAGAAAGCAAGCTTACCCATGTGAAAGATGTTATCCTCAATACTGAATTGGTTCTTGGAAATGCTATTGAGCACAGTGAGGATGAAGTGCCTCAACTTCTCATTTCTTACTTTCTTCTGGATGAACTAGACACCATGCCAAGTAATGCTATGTGGACAGATCTTAATGGATATGTGGGTTGTGAGGAATCTAAAGAGGGAAACCAACTTAAGGCATTTGTATTTGATTGTGTAATAGAATTTCTAGAATCAAATTGCTGCCAATATTATCACAGTGTATTCAAGGCAAAGTCTGCATGGATAAAGTTGCCTTTATGCATGAAAGCCAAGATGTTGGTTCAAGAGTTCAAGAATGAGATTAAGAAGTGGGCATGCGTAGCTGGGCTGATACCAGATGAAATAATAGAATGGGAGATGAGTCACTCCTTAGGGAAATGGACTGATTTTAATATTGAAGCATTTGAGGCTGGTGTTGATATAGATGGGGATGTTCTCCAAGTTTTGGTTGATGAAATTGTTCAAGACCTTTTAGATTTCAGCCAGTGA 2796 0.3952 MNDTSGKGSSCLVLTEKKKNQSLGGCIGIFFQFFGWNKRLTKKRFFSKKLLPPAHAKEASSNTFKGDEKMPNSKLHLIASENNGGFPSAKKGGNGGVEAEQKHEKTVPGLVARLMGLESMPPLQQDKSLEFSFSDSCGDEPNNEEVDLEIVFANSKKHDSSRPRKIQKTGKHERRIVVTRFGSEALQIKKVLSRARKYNDHRQHKLVSPLKSPRIASRKSASRRSRLIGAATKILEPGLQATSRAKCSLPSSTSINYSIVTERVGTRPLDVKYQCGYDDSTGKSLMGHAYCRSCGNLLDAVDYRPEVEGQQVVFTSSLEKAKSFIPSHENDVVLLRSNSSKEKLITLVNEDKNNVQYCNESSTRRMSFLADRDSSCQPCGTLDDNDEEEASSCSFKCKTQTQVQALSREKISYGSRVSNVQVKRVSSAASAVRGTKDLVTLNRSLSGRTSMRSPTEVDSSKFDLERKPPKRYDSSSPVRTFERKMTPNVSQVGGTASSNLVTVKQGNVSSGARGGTIRGFDASSRNSSNAKSKQDGQRNTYKVDENKVNEVVSFTFNSPFKQKIIIPGEKGDTSSDNVITTCFQRPPPLTSDAFGSFLEQKLKELSTQENELDTDGPSKKSITMILQELLTVLNSRHLTCSNDHISNDKYRENHGMLLGTSCSDNHLSPGSVLEASFSSSSLDESSGHGFHLHYYMNCSYDQLEQLEHDIELLDSATSFNKGKKGYEILTELINQVPRILQSLNSFRIGLTESKLTHVKDVILNTELVLGNAIEHSEDEVPQLLISYFLLDELDTMPSNAMWTDLNGYVGCEESKEGNQLKAFVFDCVIEFLESNCCQYYHSVFKAKSAWIKLPLCMKAKMLVQEFKNEIKKWACVAGLIPDEIIEWEMSHSLGKWTDFNIEAFEAGVDIDGDVLQVLVDEIVQDLLDFSQ* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0398 931 MobiDBLite consensus disorder prediction 443 541 - -
Apr6g0398 931 Pfam DUF761-associated sequence motif 97 122 IPR032795 -
Apr6g0398 931 MobiDBLite consensus disorder prediction 520 536 - -
Apr6g0398 931 MobiDBLite consensus disorder prediction 443 457 - -
Apr6g0398 931 MobiDBLite consensus disorder prediction 202 222 - -
Apr6g0398 931 MobiDBLite consensus disorder prediction 83 102 - -
Apr6g0398 931 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 928 - -
Apr6g0398 931 Pfam Domain of unknown function (DUF4378) 755 921 IPR025486 -
Apr6g0398 931 MobiDBLite consensus disorder prediction 479 512 - -
Apr6g0398 931 MobiDBLite consensus disorder prediction 458 478 - -
Apr6g0398 931 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 11 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0398 Apr-Chr6 4553444 4558947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0398 9 926 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 29.885 5.43e-78 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0398 - - aprc:113861902 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0398 6 4553444 4558947 Apr6g0398 6 4553444 4558947 ECH