Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0385 ATGCGAATGAGTTGCAATGGTTGTCGTGTTTTGCGCAAAGGTTGTAGCGAAGATTGTAGCATAAGACCGTGTTTGCAATGGATTAAAAATCCAGAATCGCAAGCTAATGCAACTGTGTTTCTTGCCAAGTTCTATGGCCGTGCTGGCCTCATGAACCTCATCAACGCTGCTCCTCAACACCATCGTCCAGCGATTTTTCGATCGTTGTTATACGAGGCATGCGGTCGAATTGTGAACCCCATTTATGGTTCTGTGGGTTTGTTATGGTCCGGGAGCTGGCAGCTCTGTCAAGCCGCCGTGGAAGCCGTTTTGAAAGGGGAGCCGATCACGCCGATTACTTCAGAAGCCGCAGCAAATGGACGGGGCCCACCTCTGAAGGCCTACGACATACGCCACGTGTCAAAAGACGAGAATTCAACCGGCTTGAATGAAGCCACTCAGCGAGCCAAGTCTCGGCCCCGGCTTAAGCGAACTGGCACCACCGTCGTCAAGCCAAAGACCCTTAAAGGAGCTCGGACCGGTCTGGATGAACTGGAAACGGCGAACCGAACCACGAGCCACGGGTCGTCCCTGAGCCACGTGGCAGAGGGAGAGAGCAAGGAGAGTGAGAGTGTTGTGTCAGTGGAGACATCGATCCTATTTCATGACGAACCAGAGTCAACTGTGAAAGCGCGTGACCAAGCCGATGAGAGTGGTTCGGAGATTGGTTTGGAATTGACACTTGGGTTCGAACCGGTGTCACGTGATGATCACGTGGTTCCTTTAAAGAAGAGAAGGATTGAGTTGATGAGTTGCTGTGGCTCAGCGGAAAATGGCTCGTGCAAGACGGAGTTGGGGCTTGAATACTCGGCTTGA 855 0.5228 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATVFLAKFYGRAGLMNLINAAPQHHRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGEPITPITSEAAANGRGPPLKAYDIRHVSKDENSTGLNEATQRAKSRPRLKRTGTTVVKPKTLKGARTGLDELETANRTTSHGSSLSHVAEGESKESESVVSVETSILFHDEPESTVKARDQADESGSEIGLELTLGFEPVSRDDHVVPLKKRRIELMSCCGSAENGSCKTELGLEYSA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0385 284 PIRSF AS2 1 284 IPR017414 -
Apr6g0385 284 MobiDBLite consensus disorder prediction 136 157 - -
Apr6g0385 284 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 281 - -
Apr6g0385 284 MobiDBLite consensus disorder prediction 178 193 - -
Apr6g0385 284 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Apr6g0385 284 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 281 - -
Apr6g0385 284 MobiDBLite consensus disorder prediction 170 204 - -
Apr6g0385 284 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0385 Apr-Chr6 4361219 4362463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0385 1 280 AS2 family AT3G02550 59.862 1.28e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr6g0385 LOB 2.1e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0385 6 4361219 4362463 Apr6g0385 6 4361219 4362463 ECH
Apr4g2755 4 36060690 36062072 Apr6g0385 6 4361219 4362463 ECH