Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0326 ATGAGGATGCCAGGAGGAGAAGCCGTTCTTTGTTTTGTGGCTTTTTTCTGGTTTTGGAGCACTACTAATGCTTTGCTTTCACCAAAGGGAGTAAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCATCTCTAGTGGATCCTCATGGTATTCTAGATAATTGGGATGGTGATGCAGTTGATCCATGTAGCTGGAATATGGTCACATGTTCCCCTGAGAACCTTGTTATTAGCCTGGGCATTCCCAGTCAAAATTTATCCGGTACTCTATCTCCAAGCATAGGAAATCTAACAAATCTTCAGACTGTGGTGCTACAGAATAACAACATAACTGGACCAATTCCTTCAGAGCTTGGAAAACTTTCCAAGCTTGAAACACTTGATCTCTCTGATAACTTCTTCAATGGTGAAATTCCTCCTTCTCTTGGTCACCTTAGAAGCCTCCAATACCTGAGGCTTAATAATAACAGTTTTGCTGGAGAATGTCCAGAGACACTAGCTAACATGGCACAGCTTGCTTTTCTTGACTTGTCTAACAACAATCTGAGCGGCCCTGTACCTAGAATTTTGGCTAAATCATTCAGCATTGTTGGAAATCCCCTAGTCTGTGCCACAGGAAAAGAAAAAAATTGCCATGGGATGACACTTATGCCTATGTCCATGAACCTAAACAGTACCGATGATGCCTTACCATCAAGCAGAAGAAAGGCTCACAAGATGGCCATTGCCTTTGGTTTGAGTCTAGGATGCCTCTGCTTGATAGTTCTTGGTTTTGGACTTGTTCTATGGAGGAGGCACAAGCATAAACAAAAGGCATTCTTTGATGTCAAAGACCGGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCAGTTAAGAGAACTTCAGATTGCTACTAACAACTTCAGCAACAAGAACATTCTGGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCCATGATGGCACTCTTGTAGCTGTAAAAAGGCTAAAAGATGGGAATGCCATTGGAGGAGAGATTCAATTTCAGACTGAAGTTGAAATGATAAGCTTGGCAGTGCATCGAAACCTTCTCAAATTGTATGGATTTTGCATGACTCCAACAGAAAGGCTCTTAGTTTATCCTTACATGTCCAATGGAAGTGTTGCTTCTCGTCTCAAGGGTAAGCCTGTGTTGGATTGGGGCACAAGGAAGCAAATTGCCTTAGGAGCAGGAAGGGGACTATTATACCTTCATGAGCAGTGCGATCCAAAGATAATACACAGAGATGTGAAAGCTGCAAATATATTGCTTGATGACTATTGTGAAGCAGTAGTTGGAGATTTTGGGTTGGCAAAGCTTTTAGATCACCAAGATTCACATGTCACAACTGCAGTGAGGGGCACTGTGGGGCATATTGCACCAGAATATCTTTCCACAGGCCAATCTTCTGAGAAGACTGATGTGTTTGGATTTGGCATTCTGCTTCTTGAATTGATCACAGGCCAGAGAGCTCTAGAATTTGGAAAATCAGCCAACCAAAAAGGAGCCATGCTTGATTGGGTAAGGAAAATTCATCAAGAAAAGAAGCTTGAAATACTTGTTGACAAGGATCTCAGGAACAACTATGACAGGATTGAGCTTGAAGAAATAGTTCAAGTGGCACTTTTGTGTACCCAATATCTTCCGGGCCACAGGCCCAAAATGTCTGAAGTTGTACGAATGCTCGAAGGTGATGGGCTTGCAGAAAAATGGGAAGCTTCTCAAAGTGCTGACACTGCTAAGTGCAAACCACACGAACTCTCTTCATCAGATCGCTATTCTGATCTCACTGATGACTCTTCATTGTTAGTCCAGGCCATGGAGCTCTCAGGCCCAAGGTGA 1875 0.4267 MRMPGGEAVLCFVAFFWFWSTTNALLSPKGVNFEVQALMGIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPENLVISLGIPSQNLSGTLSPSIGNLTNLQTVVLQNNNITGPIPSELGKLSKLETLDLSDNFFNGEIPPSLGHLRSLQYLRLNNNSFAGECPETLANMAQLAFLDLSNNNLSGPVPRILAKSFSIVGNPLVCATGKEKNCHGMTLMPMSMNLNSTDDALPSSRRKAHKMAIAFGLSLGCLCLIVLGFGLVLWRRHKHKQKAFFDVKDRHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGNVYKGVLHDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAMLDWVRKIHQEKKLEILVDKDLRNNYDRIELEEIVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAEKWEASQSADTAKCKPHELSSSDRYSDLTDDSSLLVQAMELSGPR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0326 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Apr6g0326 624 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Apr6g0326 624 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 7 624 - -
Apr6g0326 624 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Apr6g0326 624 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Apr6g0326 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Apr6g0326 624 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Apr6g0326 624 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0326 624 SMART serkin_6 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0326 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Apr6g0326 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Apr6g0326 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 624 - -
Apr6g0326 624 SUPERFAMILY L domain-like 34 305 - -
Apr6g0326 624 Pfam Protein kinase domain 305 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0326 624 MobiDBLite consensus disorder prediction 585 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0326 Apr-Chr6 3580924 3585293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0326 1 624 Receptor kinase-like Gene Family AT5G16000 76.899 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Apr6g0326 Pkinase 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0326 - - gmx:100806650 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0326 6 3580924 3585293 Apr6g0326 6 3580924 3585293 ECH
Apr6g0326 6 3580924 3585293 Apr4g2593 4 34693988 34698068 PCT