Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0315 ATGGATCCACCACTTTGTGCTAAGTGTGGCTTGTTTGGTTCAACTACAGACCTAAACCTTTGCTCAAAGTGCTACCGAGATTATCTGGAATCGAATAACGTTTTGAAGATCGAATTCAAGAGTTCGACAGGTAAGACCTATGTTTTTGAATCATCTATGTCTGGTAAAGCATGTGCTTCTGGGAGCTCTTCCACTGTTCCCAGTGACTCTAAGAGTGAGGAGAAAAGGTGCAAAAGCTGCAATAAGAAGGTTGGACTAACTGGCTTTAAGTGCCGTTGTGGAGAGTTGTTTTGTGGAAAGCATAGATACCCAGAAAAGCATGCATGCAAAGTGGATTTAAAGGAAACTGGTCGTCAAACTTTGGCTAAACAAAATCCTAAATGCACTGGTGATAAATTAAAAAATAGGATCTAG 414 0.4058 MDPPLCAKCGLFGSTTDLNLCSKCYRDYLESNNVLKIEFKSSTGKTYVFESSMSGKACASGSSSTVPSDSKSEEKRCKSCNKKVGLTGFKCRCGELFCGKHRYPEKHACKVDLKETGRQTLAKQNPKCTGDKLKNRI* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0315 137 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 8 36 - -
Apr6g0315 137 Pfam A20-like zinc finger 5 26 IPR002653 GO:0003677|GO:0008270
Apr6g0315 137 SMART A20_3 3 26 IPR002653 GO:0003677|GO:0008270
Apr6g0315 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 137 - -
Apr6g0315 137 ProSiteProfiles Zinc finger A20-type profile. 1 33 IPR002653 GO:0003677|GO:0008270
Apr6g0315 137 Pfam AN1-like Zinc finger 77 111 IPR000058 GO:0008270
Apr6g0315 137 ProSiteProfiles Zinc finger AN1-type profile. 71 117 IPR000058 GO:0008270
Apr6g0315 137 Gene3D - 50 131 IPR035896 -
Apr6g0315 137 SMART AN1_Zf_4 77 114 IPR000058 GO:0008270
Apr6g0315 137 SUPERFAMILY AN1-like Zinc finger 65 131 IPR035896 -
Apr6g0315 137 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 4 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0315 Apr-Chr6 3345061 3345474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0315 9 134 C2H2 Transcription Factor Family AT3G52800 35.484 5.85e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0315 - - aprc:113868117 291.967