Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0314 ATGGATCCTCCACTTTGTGCTAATGGTTGTGGCTTCTTTTCTTCTCCTGCAAACAAAAACCTTTGCTCAAAGTGTTACAAAGATTGTCTCAAAGAAAAAATATCTAAATCAAATGAAGTTTTGAAGAGTCAAATCAAGTGTTCGAAGGATGAGCTCTTTACTCTTGACTCATCTACGTCTCTTAAACCATGTTCTTCAAATAACCTTATAACTAATGTTTGTGATCCTATGGCTAGTGTTGCCATTTATGACTCTTCAAGCGTGAAGGACAAGAAAAAGAGGTGCAAAAGCTGCAATAAAAAGGTTGGACTAATTGGGTTTGAGTGTCGTTGTGGGGATGTTTTTTGTGGAAAACATAGACACCCAGAAGAGCATGATTGCAAAGTGGATTTCAAGGAAATTGGTCGTCAAGCTTTGGCTAAACAAAATCCTATATGTATTGGTGATAAATTAGAACATAGGATCTAA 468 0.3654 MDPPLCANGCGFFSSPANKNLCSKCYKDCLKEKISKSNEVLKSQIKCSKDELFTLDSSTSLKPCSSNNLITNVCDPMASVAIYDSSSVKDKKKRCKSCNKKVGLIGFECRCGDVFCGKHRHPEEHDCKVDFKEIGRQALAKQNPICIGDKLEHRI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0314 155 Gene3D - 74 148 IPR035896 -
Apr6g0314 155 SUPERFAMILY AN1-like Zinc finger 84 149 IPR035896 -
Apr6g0314 155 Gene3D - 1 70 - -
Apr6g0314 155 ProSiteProfiles Zinc finger AN1-type profile. 89 135 IPR000058 GO:0008270
Apr6g0314 155 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Apr6g0314 155 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 155 - -
Apr6g0314 155 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Apr6g0314 155 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Apr6g0314 155 Pfam AN1-like Zinc finger 95 130 IPR000058 GO:0008270
Apr6g0314 155 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 155 - -
Apr6g0314 155 SMART AN1_Zf_4 95 132 IPR000058 GO:0008270
Apr6g0314 155 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0314 Apr-Chr6 3341670 3342137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0314 5 152 C2H2 Transcription Factor Family AT3G52800 38.365 1.28e-24 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0314 - - gmx:102666624 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0314 6 3341670 3342137 Apr6g0314 6 3341670 3342137 ECH