Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0312 ATGCAAGCCAGGGAGATCTCAGGGCTAAATTATTTACTCCCTTCAAACCCATCTTCATCTCCATACCCTTCTAATAACTACACCATGATTCAAAACAACATTCCCACATTTCAATTCCAAAGATTCCCTAACCAATTATATGGTTACAACCACAACCCTCCTTATCAAGTTCATGACTTTAGTCCTCAATCATCATGCATAAGCAGCAACTCCACTTCAGATGAAGCTGAGGAGCAAAACCTAAGTCTCCTCAATGAGAGGAAGCACAGAAGGATGATATCAAACCGAGAATCTGCACGTAGATCACGCATGAGGAAGCAGAAACACCTTGATGAACTGTGGTCACAAGTTGTTTGGCTAAGAAATGAGAATCACCAGCTCATAGACAAGCTGAACCATGTGTCAGAGAGCCATGATCAAGTGCTTCAAGAGAATGCTCAGCTAAAAGAGGAAGCTTCAGAACTTCGCCAAATGCTAAGGGACATGCAGATACATAGTCCTTCCCCTTCTTCTTTCACCCCTTTGGAAGATGAAGTCCCTTGCAACTCAGCATATCTCAGATCTGATTCTTCAAACCAATCAAACTCTAGTAACATGCTTGGCTAA 606 0.4224 MQAREISGLNYLLPSNPSSSPYPSNNYTMIQNNIPTFQFQRFPNQLYGYNHNPPYQVHDFSPQSSCISSNSTSDEAEEQNLSLLNERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDQVLQENAQLKEEASELRQMLRDMQIHSPSPSSFTPLEDEVPCNSAYLRSDSSNQSNSSNMLG* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0312 201 Gene3D - 85 141 - -
Apr6g0312 201 MobiDBLite consensus disorder prediction 1 20 - -
Apr6g0312 201 SUPERFAMILY Leucine zipper domain 87 137 IPR046347 GO:0003700|GO:0006355
Apr6g0312 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 148 IPR004827 GO:0003700|GO:0006355
Apr6g0312 201 SMART brlzneu 83 147 IPR004827 GO:0003700|GO:0006355
Apr6g0312 201 MobiDBLite consensus disorder prediction 184 201 - -
Apr6g0312 201 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 194 IPR044521 -
Apr6g0312 201 PANTHER BZIP TRANSCRIPTION FACTOR 1 194 - -
Apr6g0312 201 MobiDBLite consensus disorder prediction 164 201 - -
Apr6g0312 201 Coils Coil 131 165 - -
Apr6g0312 201 CDD bZIP_plant_GBF1 88 139 IPR045314 GO:0003700|GO:0006355
Apr6g0312 201 Pfam bZIP transcription factor 87 145 IPR004827 GO:0003700|GO:0006355
Apr6g0312 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 90 105 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0312 Apr-Chr6 3327679 3328341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0312 14 179 bZIP Transcription Factor Family AT3G30530 59.412 1.83e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr6g0312 bZIP_1 3.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0312 - - aprc:113867865 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0312 6 3327679 3328341 Apr6g0312 6 3327679 3328341 ECH
Apr6g0312 6 3327679 3328341 Apr4g2587 4 34639344 34644867 PCT