Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0308 ATGACAAACCGTCTTGAACCAAAGTCAAAGAAGACAAAATCAAGAAAGAACAAGATAGTCATTGATGAGAACGCACCTTTGTTACCTAAGACTCAGGAGACTGATGCTGAAGGGTTTAATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTCAACTTATCCACAACAATTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGAAAAAGCTGGGGATGGTGCCTGGTCTTATTGCAATAATCTTAACAGCTTTGTTGACTGCAAAGTCAATTGAGTTCATGATTAGGATTTCCAAGGCAGGAAATATTTCTTCGTACGGAAATTTAGTGGGCGATGCCTTTGGCAAATTTGGAAAAGCTGTGTTGCAGATATGTGTCATAGTCAACAACATTGGAATGCTGATCATTTACATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCAAGTGGAACTCACCATTCCGGTGTTCTTGAAGGATGGTTTGGAGTTCATTGGTGGACTGGACGTACATTTGTTCTCCTTTTTACAACACTTGCTGTGTTTGCACCTTTGGCCTGCTTCAAGCGAATTGATTCTTTGAGATACACTTCTGCATTATCATTTGGACTAGCAGTTGTTTTCCTTGTCATTGCTGTGGGAATTTCAATCTTCAAGATTGTAATTGGAGGCATTGAGATGCCTAGGCTCTTTCCAATCATTACTGATGTAACGTCCATTATTGAACTCTTCACTGTAGCACCTGTGGTTGTGACAGCGTATCTATGCCACTTCAATGTACACCCCATAGAAAATGAACTTGAGGACTCATCACAAATACATGGGATTGTGCGTACTTCCCTTGCTCTATGCTCTTCAGTGTACTTAATAACAAGCTTCTTTGGTTTCCTCCTATTTGGTGAAGAAACACTTGATGATGTGCTTGCCAATTTTGACACTGATCTTGGAATTCCTTTTGGTTATGTGCTTAATGATGCCGTTCGTTTTAGCTATGCTGGACATCTTCTGCTTGTATTTCCTGTTGTCTTCTATGCATTAAGAATCAACATAGATGATCTCATATTTTCTTCATCAAGGCCACTGGTTCTAGATAACTTCAGATTTGCATCAATTACCATTGCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGCATTTTTAGCATTCATATTTCCAGCTGCCATCACTCTTAGGGATCGGTACAACATTGCAACCAAGAAAGACAAGATCCTATCTGTCTTTATGTTAGTTCTTGCAGTCTTTTCGAATGCTATGGCTATATACAGTAATGCCTCTGCCATTATCAAGAAGAATATAGCATAA 1383 0.397 MTNRLEPKSKKTKSRKNKIVIDENAPLLPKTQETDAEGFNDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLIAIILTALLTAKSIEFMIRISKAGNISSYGNLVGDAFGKFGKAVLQICVIVNNIGMLIIYMIIIGDVISGTSSSGTHHSGVLEGWFGVHWWTGRTFVLLFTTLAVFAPLACFKRIDSLRYTSALSFGLAVVFLVIAVGISIFKIVIGGIEMPRLFPIITDVTSIIELFTVAPVVVTAYLCHFNVHPIENELEDSSQIHGIVRTSLALCSSVYLITSFFGFLLFGEETLDDVLANFDTDLGIPFGYVLNDAVRFSYAGHLLLVFPVVFYALRINIDDLIFSSSRPLVLDNFRFASITIALIGVIFLGANFIPSIWDIFQFTGATAAAFLAFIFPAAITLRDRYNIATKKDKILSVFMLVLAVFSNAMAIYSNASAIIKKNIA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0308 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 6 458 - -
Apr6g0308 460 PANTHER AMINO ACID TRANSPORTER 6 458 - -
Apr6g0308 460 Pfam Transmembrane amino acid transporter protein 45 454 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0308 Apr-Chr6 3264636 3268471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0308 7 458 Amino Acid or Auxin Permease AAAP Family AT3G30390 64.159 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0308 K14207 - gmx:100785277 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0308 6 3264636 3268471 Apr6g0308 6 3264636 3268471 ECH
Apr6g0308 6 3264636 3268471 Apr4g2584 4 34611019 34615004 PCT