Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0307 ATGGGAAGTGGAAGTCTTGCACCTAAGGCAGAGAAGACAAAATTAAGAAAGAACAAGACAGTTGTTGATGAGAATGCTCCCTTGATACCAAAGACTCAGGACACTGATGCTGAAGGGTTTAATGATTTCAATGGAGCTTCATTTTCTGGAGCTGTTTTCAACTTATCCACTACAATTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGCAAAAGTTGGGGATGGTACCTGGTCTTCTTTCAATAATCTTAACAGCTTTGTTGACAGAGAAGTCAATTGAGTTTATGATTAAGATTTCAAGGGCAGGGAGTCTTTGTTCTTATGGAAGTCTCATGGGTGATGCTTTTGGGAAATATGGAAAAGCTTTGGTGCAGATATGTGTTATAGTCAATAACATTGGTGTTTTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGTACATCTTCTGGTGGAACTCACCATTCTGGTATCCTTGAAGGATGGTTAGGAGTTCACTGGTGGACTGGGCGTACGTTTGTTCTTTTGTTTACTACACTTGCTGTGTTTGCACCTTTGGTCAGCTTTAAGAGAATCGATTCATTGAAATTCACATCTGCATTATCAGTTGGACTAGCAGTTGTTTTTCTCGTCATTGCTGTGGGAATATCAATCTTCAAGATTATAATTGGAGGCATTGGGATGCCCAGACTCTTCCCAATCATTACTGATCTATCATCAGTTTTTGAACTGTTCACTGTAGTTCCTGTGCTAGTGAATGCCTATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCTTCACAGATGCATGGGGTTGTAAGAACTTCCCTTGCTCTATGTGCTTCAGTGTACTTATTAACAAGCTTCTTTGGGTACCTTCTATTTGGTGAAGGAACTCTTGATGATGTTCTTGCCAATTTTGATGCTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCCGTTCGATTTAGCTATGCTGCACATATTGTGCTTGTATTTCCTGTAGTCTTCTATGCAGTGAGGATCAACCTTGATGGTCTCATATTTTCATCATCTAGGCCTTTGGTTCTAGATAAATTCAGATTTTCATCTATTACTATTTCCCTTATTGGTGTTATCTTCCTTGGAGCTAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGCTTGTGTAGGATTCATATTTCCGGCTGCCATCACTCTTAGGGATAGACACAACATAGCAACTAAAACCGACAAGATTCTATCTGTCTTTATGTTAGTCCTGGCAGTCTTGTCAAATGCAGTGGCTATATACAGTGATGCCAATGCCTTGATCAAGAAGAATAAGACATAA 1386 0.3968 MGSGSLAPKAEKTKLRKNKTVVDENAPLIPKTQDTDAEGFNDFNGASFSGAVFNLSTTIIGAGIMGLPACVQKLGMVPGLLSIILTALLTEKSIEFMIKISRAGSLCSYGSLMGDAFGKYGKALVQICVIVNNIGVLIIYMIIIGDVISGTSSGGTHHSGILEGWLGVHWWTGRTFVLLFTTLAVFAPLVSFKRIDSLKFTSALSVGLAVVFLVIAVGISIFKIIIGGIGMPRLFPIITDLSSVFELFTVVPVLVNAYICHYNVHSIDNELEDSSQMHGVVRTSLALCASVYLLTSFFGYLLFGEGTLDDVLANFDADLGIPFGSVLNDAVRFSYAAHIVLVFPVVFYAVRINLDGLIFSSSRPLVLDKFRFSSITISLIGVIFLGANFIPSIWDIFQFTGATAAACVGFIFPAAITLRDRHNIATKTDKILSVFMLVLAVLSNAVAIYSDANALIKKNKT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0307 461 Pfam Transmembrane amino acid transporter protein 46 450 IPR013057 -
Apr6g0307 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 460 - -
Apr6g0307 461 PANTHER AMINO ACID TRANSPORTER 7 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0307 Apr-Chr6 3256869 3261625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0307 21 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 66.440 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0307 K14207 - gmx:100791286 772.696