Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0307 ATGGGAAGTGGAAGTCTTGCACCTAAGGCAGAGAAGACAAAATTAAGAAAGAACAAGACAGTTGTTGATGAGAATGCTCCCTTGATACCAAAGACTCAGGACACTGATGCTGAAGGGTTTAATGATTTCAATGGAGCTTCATTTTCTGGAGCTGTTTTCAACTTATCCACTACAATTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGCAAAAGTTGGGGATGGTACCTGGTCTTCTTTCAATAATCTTAACAGCTTTGTTGACAGAGAAGTCAATTGAGTTTATGATTAAGATTTCAAGGGCAGGGAGTCTTTGTTCTTATGGAAGTCTCATGGGTGATGCTTTTGGGAAATATGGAAAAGCTTTGGTGCAGATATGTGTTATAGTCAATAACATTGGTGTTTTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGTACATCTTCTGGTGGAACTCACCATTCTGGTATCCTTGAAGGATGGTTAGGAGTTCACTGGTGGACTGGGCGTACGTTTGTTCTTTTGTTTACTACACTTGCTGTGTTTGCACCTTTGGTCAGCTTTAAGAGAATCGATTCATTGAAATTCACATCTGCATTATCAGTTGGACTAGCAGTTGTTTTTCTCGTCATTGCTGTGGGAATATCAATCTTCAAGATTATAATTGGAGGCATTGGGATGCCCAGACTCTTCCCAATCATTACTGATCTATCATCAGTTTTTGAACTGTTCACTGTAGTTCCTGTGCTAGTGAATGCCTATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCTTCACAGATGCATGGGGTTGTAAGAACTTCCCTTGCTCTATGTGCTTCAGTGTACTTATTAACAAGCTTCTTTGGGTACCTTCTATTTGGTGAAGGAACTCTTGATGATGTTCTTGCCAATTTTGATGCTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCCGTTCGATTTAGCTATGCTGCACATATTGTGCTTGTATTTCCTGTAGTCTTCTATGCAGTGAGGATCAACCTTGATGGTCTCATATTTTCATCATCTAGGCCTTTGGTTCTAGATAAATTCAGATTTTCATCTATTACTATTTCCCTTATTGGTGTTATCTTCCTTGGAGCTAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGCTTGTGTAGGATTCATATTTCCGGCTGCCATCACTCTTAGGGATAGACACAACATAGCAACTAAAACCGACAAGATTCTATCTGTCTTTATGTTAGTCCTGGCAGTCTTGTCAAATGCAGTGGCTATATACAGTGATGCCAATGCCTTGATCAAGAAGAATAAGACATAA 1386 0.3968 MGSGSLAPKAEKTKLRKNKTVVDENAPLIPKTQDTDAEGFNDFNGASFSGAVFNLSTTIIGAGIMGLPACVQKLGMVPGLLSIILTALLTEKSIEFMIKISRAGSLCSYGSLMGDAFGKYGKALVQICVIVNNIGVLIIYMIIIGDVISGTSSGGTHHSGILEGWLGVHWWTGRTFVLLFTTLAVFAPLVSFKRIDSLKFTSALSVGLAVVFLVIAVGISIFKIIIGGIGMPRLFPIITDLSSVFELFTVVPVLVNAYICHYNVHSIDNELEDSSQMHGVVRTSLALCASVYLLTSFFGYLLFGEGTLDDVLANFDADLGIPFGSVLNDAVRFSYAAHIVLVFPVVFYAVRINLDGLIFSSSRPLVLDKFRFSSITISLIGVIFLGANFIPSIWDIFQFTGATAAACVGFIFPAAITLRDRHNIATKTDKILSVFMLVLAVLSNAVAIYSDANALIKKNKT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0307 461 Pfam Transmembrane amino acid transporter protein 46 450 IPR013057 -
Apr6g0307 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 460 - -
Apr6g0307 461 PANTHER AMINO ACID TRANSPORTER 7 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0307 Apr-Chr6 3256869 3261625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0307 21 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 66.440 0.0 602