Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0279 ATGGCTGACACACCTCCATTGAAAGATGAGCTTGACATTGTGATCCCCACCATAAGGAACCTTGACTTTCTTGAAATGTGGAGGCCATTTTTTGAGCCTTATCATTTGATCATTGTTCAAGATGGTGACCCCACCAAGACCATTAAGGTTCCTCCTGGTTTTGATTATGAGCTTTACAACCGCAATGACATCAACAAGCTTTTAGGTCCAAGGGCCTCTTGCATCTCCTTCAAGGATTCTGCTTGTCGTTGCTTTGGCTACATGGTGTCTAAGAAGAAGTACATCTTCACCATTGATGATGACTGTTTTGTTGCCAGTGATCCATCTGGAAAACAGATTAATGCACTTCAGCAGCATATTAAGAACCTTCTCTGTCCATCCACTCCATATTTTTTCAATACCCTTTATGACCCCTTCAGAGAAGGTGTAGATTTTGTTCGTGGATATCCTTTTAGTCTTCGTGAAGGTGTACCAACTGCGGTTTCACATGGACTTTGGCTTAACATCCCTGATTATGATGCTCCTACACAGCTTGTGAAGCCTCTTGAGAGGAACACTAGGTATGTGGATACTGTTCTGACCATACCAAAAGGAACCTTATTTCCCATGTGTGGAATGAACTTGGCATTTGATCGTGATCTTATTGGACCAGCAATGTACTTTGGTCTAATGGGAGATGGTCAACCAATTGGACGCTATGATGATATGTGGGCTGGCTGGTGCTGCAAGGTGATCTGTGATCATTTGGGGCTAGGAATCAAGACTGGTCTGCCATATATCTATCACAGCAAGGCAAGTAACCCATTTGTAAATCTGAGGAAAGAGTACAAAGGTATATTCTGGCAGGAAGACATCATTCCATTCTTCCAGAATATTGTTCTTCCAAAAGAATGCACAACTGTTCAAAAGTGCTACATTGAACTCTCCAAACAAGTCAAGGAAAAACTTTCAAAGGTAGATCCTTACTTTGACAAGCTGGCAGATGCTATGGTCACTTGGATTGAAGCTTGGGATCAGCTTAACCCTGTTGGAGGCAAAAAATAA 1044 0.4215 MADTPPLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPTKTIKVPPGFDYELYNRNDINKLLGPRASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVASDPSGKQINALQQHIKNLLCPSTPYFFNTLYDPFREGVDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDTVLTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQNIVLPKECTTVQKCYIELSKQVKEKLSKVDPYFDKLADAMVTWIEAWDQLNPVGGKK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0279 347 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 3 344 - -
Apr6g0279 347 SUPERFAMILY Nucleotide-diphospho-sugar transferases 32 241 IPR029044 -
Apr6g0279 347 Pfam Reversibly glycosylated polypeptide 8 341 IPR037595 -
Apr6g0279 347 PIRSF UPTG 1 345 IPR004901 GO:0016866|GO:0071669
Apr6g0279 347 PANTHER UDP-ARABINOSE MUTASE 3 344 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0279 Apr-Chr6 2855475 2858061 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0279 K13379 - gmx:100778357 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0279 6 2855475 2858061 Apr6g0279 6 2855475 2858061 ECH
Apr7g1384 7 20976765 20979822 Apr6g0279 6 2855475 2858061 ECH
Apr6g0279 6 2855475 2858061 Apr4g2553 4 34333836 34336255 PCT