Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0275 ATGATAGTTTTAGGCACTATTCACTTCCTTTCTCTCTCTCTTTTCTTATTCTACCCTTTCACACTCCTTGAAGCCTATGCCCCAATTGAAAACTTTAGCATCGATTGTGGATCCAACGCCAACTCTTTCGATGGTGATAGAAGATGGATAAAAGACACAAACTCAAAACTCTTGTCCCTACACCACAACCAAACCATCACTGCTCAAGCTCCTTCAATTACCAACCAAGCCCCATACTCCACAGCTCGTCTTTCTTATTCACTATTCACCTATTCTTTCAATGTCACTTCAGGCCCAAAATTCTTGCGCCTTTTCTTCTACCCAGATTCATACCCTGGGTTCCATCGCTCTAATGCTTTGTTCACGGTTAAAGCTGGTGGGTTCACACTCCTCAAAGACTTCAACTCTTCACTCTTTGTTGATGTTGACACTGACACCTCTCCTACCAACACCATCTTCAAAGAATACATCATTCACGTAGGTGATGATGATGATGATGATCAAAGCCTCAACTTAACCTTCACTCCCTCTTCAAAATCTTATGCTTTCATCAACGGAATTGAGATCGTGTCCATGCCCTCTTACCTCTATTATAGTGATCCCAACGATATCTTCAACCACATAATCAAATTCGTGGGTCACTTAGACTCATTATTCACAATTGAAAACAACACTGCCCTTGAGACACAATATAGGCTTAACTTTGGAGGTAGATATCTCCCACCCAGACAAGACTCTGGCATACTCAGAAGCTGGGAAAGCGATGATACGCATTATCTAAGCTCTTCGAGTGCCGAACCCATAGATTTATCAGGCAGGGATATTCGTGTTAATCCTGATTATATAGCACCCAAAGAAATGTATGAGACAGCAAGGTCCATGGGTAATAACGCCACTCACAATAAGATTTCTAATCTGACATGGGAATTCCCAGTTGATTCTGGCTTCTACTACTTGGTAAGGCTTCATTTTTGTGAGATATTCTACCGACAAATCAATGAAAGAGGCGACAGAGCATTCTACATCTACATAGCGGAACAGATGGCTGAGACCCGTGCGGATGTTCAAATGTGGAGCAATGAGAACAACAACCTTACTGTGTACAGAGATTACGTTGTGTTCATTCCTAAGAATAACGAGAATCATAAAAAGTCAAATTTGTCACTCCAAATGCATCCTCGGCCAGCTGATTCGACTCTTTACAGCGATGTATTATTAAATGGGCTCGAAGTGTTCAAAATCAGCAACCCTAATGGAAGTAACCTCGCTGGACCCAACCCTGACACTGTTCTATTCACATCCCCCACAACCTTGTACGTTCCAAACCCCAACAAGAGTTTTCTCAACCCCCTCATAGGAAAACTTGTGGTTGTTGTTGGCGGGCTCTCTGGGGTTGTTTTTCTCTCCATGGTTGCTTTCTTCTATCGTAAATGGGGTCAACATACAGAGTCCAAGTCAACCTCGTCGTTACCGTCTGAACTCTGTCGTAGGTTTTCATTGGCGGAAATGAGAGAAGCCACTAACAACTTCGATGATGCCTTAATAACTGGAGTGGGAGGATTTGGTAACGTGTACAAAGGGTACATAGATCACCGTGGTCCTTCAATACCCGTTGCGATCAAACGGTTAAGACCCGGTTCACGACAAGGGGCCCACGAGTTCTTAACCGAGATTCAAATGCTTTCTCAGCTTCGTCATCTTCATCTCGTGTCACTGGTAGGGTATTGTTCCGAGAGCCACGAGATGATTCTGGCCTACGATTTCATGCCACGTGGAACCCTCCGTGACCATCTCTACCACAATGATAACGCTCCTCTTTCGTGGAAGCAACGGCTGAGAATCTGCATGGGAGCGGCGCGTGGGCTGCATTACCTCCATAGAGGCGCGACGGACAGCATCATTCACCGCGACGTGAAGACCACGAACATTTTATTGGATGCGAAATGGGTGGCTAAGGTTTCGGATTTCGGGTTGTGTAGAGTGGGGCCCAGTGGGGTCTCGAAGACCCACGTCAGCACGGTGGCCAAGGGTAGTCTCGGGTATTTGGATCCTGAATATTATAAACGGTCGCGATTGACTGTGAAATCTGACGTGTACTCTTTTGGGGTGGTTTTGTTCGAGGTGCTGTGTGCGAGGCCACCTTTGATGAATTGCGTGGAGAAGAGACAGATGTCGCTTGCTGAATGGGCCAGAGAGTGCTATGAAAACGGAACCGTTGATCAGATTGTGGACCCCGTGATCAAGGGCGAGATTGCGCCCGAGTGTTTGAAGAAGTATTGTGAGGCTGCAGTCAGTTGTTTGCTTGATGACGGGGCACAACGACCGTCCATGAACGACGTCGTTTGGATGCTGGAGTTCGCGTTACAACTCCAAGAGGATGGTGAGGTTGATGCAGAGACTTTCAGTGAAGAACAAATATCTGTTTCTAGTGAGAGCAGCGCGCAGAGCATGCCCATGCTAACGAAGAATTAG 2472 0.4587 MIVLGTIHFLSLSLFLFYPFTLLEAYAPIENFSIDCGSNANSFDGDRRWIKDTNSKLLSLHHNQTITAQAPSITNQAPYSTARLSYSLFTYSFNVTSGPKFLRLFFYPDSYPGFHRSNALFTVKAGGFTLLKDFNSSLFVDVDTDTSPTNTIFKEYIIHVGDDDDDDQSLNLTFTPSSKSYAFINGIEIVSMPSYLYYSDPNDIFNHIIKFVGHLDSLFTIENNTALETQYRLNFGGRYLPPRQDSGILRSWESDDTHYLSSSSAEPIDLSGRDIRVNPDYIAPKEMYETARSMGNNATHNKISNLTWEFPVDSGFYYLVRLHFCEIFYRQINERGDRAFYIYIAEQMAETRADVQMWSNENNNLTVYRDYVVFIPKNNENHKKSNLSLQMHPRPADSTLYSDVLLNGLEVFKISNPNGSNLAGPNPDTVLFTSPTTLYVPNPNKSFLNPLIGKLVVVVGGLSGVVFLSMVAFFYRKWGQHTESKSTSSLPSELCRRFSLAEMREATNNFDDALITGVGGFGNVYKGYIDHRGPSIPVAIKRLRPGSRQGAHEFLTEIQMLSQLRHLHLVSLVGYCSESHEMILAYDFMPRGTLRDHLYHNDNAPLSWKQRLRICMGAARGLHYLHRGATDSIIHRDVKTTNILLDAKWVAKVSDFGLCRVGPSGVSKTHVSTVAKGSLGYLDPEYYKRSRLTVKSDVYSFGVVLFEVLCARPPLMNCVEKRQMSLAEWARECYENGTVDQIVDPVIKGEIAPECLKKYCEAAVSCLLDDGAQRPSMNDVVWMLEFALQLQEDGEVDAETFSEEQISVSSESSAQSMPMLTKN* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0275 823 MobiDBLite consensus disorder prediction 804 823 - -
Apr6g0275 823 CDD STKc_IRAK 517 785 - -
Apr6g0275 823 Gene3D Phosphorylase Kinase; domain 1 472 588 - -
Apr6g0275 823 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0275 823 SMART serkin_6 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0275 823 PANTHER OS07G0166700 PROTEIN 479 798 IPR045272 GO:0004714|GO:0006468
Apr6g0275 823 PANTHER OS07G0166700 PROTEIN 17 476 IPR045272 GO:0004714|GO:0006468
Apr6g0275 823 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 17 476 - -
Apr6g0275 823 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 479 798 - -
Apr6g0275 823 Gene3D - 226 414 - -
Apr6g0275 823 Gene3D - 31 193 - -
Apr6g0275 823 Pfam Malectin-like domain 34 414 IPR024788 -
Apr6g0275 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Apr6g0275 823 Gene3D Transferase(Phosphotransferase) domain 1 589 810 - -
Apr6g0275 823 Pfam Protein tyrosine and serine/threonine kinase 517 781 IPR001245 GO:0004672|GO:0006468
Apr6g0275 823 SUPERFAMILY Protein kinase-like (PK-like) 485 787 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0275 Apr-Chr6 2809151 2811857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0275 21 799 Receptor kinase-like Gene Family AT3G51550 47.763 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr6g0275 Malectin_like 9.2e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0275 - - gsj:114381619 890.952