Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0274 ATGGCAACATCTGAGATTAACTGGGACAGGTTAGATAAAACAAAGTTCTATGTCGTGGGAGCAGGACTCTTTACGGGTGTTACAGTGGCACTCTACCCAGTTTCTGTCGTGAAAACTAGATTGCAGGTTGCTTCAAAGGATACTCTGGAGCGAAATGCATTTTCTGTTGTGAAAGGATTGCTTAAAACGGATGGCATCCCTGGTCTGTATAAAGGTTTTGGCACGGTTATCACTGGTGCCATTCCTGCCAGAATCATATTCCTCACTGCCTTAGAGACTACAAAGGTGGCTTCCTTTAGGATGCTTGAGCCATTTAGGTTATCTGAAACTACCCAGGCTGCCATATCAAATGGAATTGCAGGCATGGTATCGTCGCTTTTGTCACAAGCTGTGTTTGTTCCAATTGACGTGGTTAGTCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGTGGTGGTTTGGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGAATCAGGGGATTATATAGAGGTTTTGGTCTATCTGTCATGACTTATTCACCATCTAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTCAACGCTTCTTATGGAGATTCTTGGGAGATAGGTTCAGTGAGGAAGGTACTCCTCCTAGTCTATCAAAGATTATTATGGTTCAGGCCAGTGGAGGGATTTTCGCTGGTGCTACTGCATCCTGCATTACAACCCCATTGGATACTATCAAGACAAGGTTACAGGTGATGGGGCTTGAAAACAAAAGTTCTGTAAAACAAATTGTCAAAGACTTGATAGTTGAGGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATATTGGCCTATGAATATCTGAAGCGATTATGTGCAAAAGATGAAGAGGCAGTTGGTAATTGA 948 0.4293 MATSEINWDRLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTLERNAFSVVKGLLKTDGIPGLYKGFGTVITGAIPARIIFLTALETTKVASFRMLEPFRLSETTQAAISNGIAGMVSSLLSQAVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFLWRFLGDRFSEEGTPPSLSKIIMVQASGGIFAGATASCITTPLDTIKTRLQVMGLENKSSVKQIVKDLIVEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEEAVGN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0274 315 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 311 - -
Apr6g0274 315 Pfam Mitochondrial carrier protein 114 202 IPR018108 -
Apr6g0274 315 Pfam Mitochondrial carrier protein 21 96 IPR018108 -
Apr6g0274 315 Pfam Mitochondrial carrier protein 226 309 IPR018108 -
Apr6g0274 315 Gene3D Mitochondrial carrier domain 17 313 IPR023395 -
Apr6g0274 315 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 311 - -
Apr6g0274 315 SUPERFAMILY Mitochondrial carrier 9 302 IPR023395 -
Apr6g0274 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Apr6g0274 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 305 IPR018108 -
Apr6g0274 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Apr6g0274 315 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Apr6g0274 315 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Apr6g0274 315 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Apr6g0274 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0274 Apr-Chr6 2801852 2808092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0274 6 310 Chloroplast and Mitochondria Gene Families AT5G15640 77.524 1.99e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0274 K15121 - gmx:100819519 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0274 6 2801852 2808092 Apr6g0274 6 2801852 2808092 ECH
Apr6g0274 6 2801852 2808092 Apr4g2550 4 34312065 34317387 PCT