Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0272 ATGACGCAACCATCAACTCCATCTTTCAAAGTTGTTCAAGTTTGTTCAGTAGCACCATTACAAGGACCAACCCTTTCCACCACGCCAACCTCTCTGCCTCTAACCTTCTTTGATCTCTTATGGCTAAGGTTTCCACCTGTTGAGCGTCTCTTCTTCTACTCTTTCCCACACTCATCTTCTTCTTTCTTTGATTCTGTTCTTCCTGCTCTCAAACACTCTCTTTCACTCACTCTCCAACACTTTCTCCCTTTCGCTGGTAACATCACATGGCCACATGATTCTTCCATACCCATCATCAACTATTTTCCTGGTGATGCTGTTTCCTTCACTGTTGCTGAGTCCAATGCAAACTTCACCCATCTTTGTTCCCATCTTTGTGAAGCAGAAAAAAGACAACCCTTGATACCCCATTTGAATACTTCTCATGAACAAGCTTCTGTGTTAGCACTTCAAGTCACTGTGTTCCCAAATTCCGGTTTTTGCATTGGAATAACCACACACCATGCAGCTTTTGATGGAAAATCTTCAACTTTGTTTATGAAATCATGGGCTTATGCATGCTCCAATAACCTTGGAGAATCATCGTCTTTGTCATTACCTCAACATCTAACACCTTTCTTTGATAGATCAGTGATAAAAGACCCTGAAGGAATTAGCCAAGCCTATGTGGATGCATGGATGAATCATGGAGGATCAAACAATCGGAGTCTCAAGGTGTGGGAGTCCATTAATGCAACACCAAGTGATGCAGTTAAAGGTTTGTTTGAATTAACCCCTTCACATATTGAGAAGCTCAAGCAACATGCAAATTCTAAGATGAAAACAAAGGTTAAGTTATCAACGTTTTCAGTTACATGTGCTTATGTTTTAGCATGTTTGGTCAAAGCAGAACAACCAAAGACAAATCGTATAGTGTTCATATTTAGTGTGGATTGTAGATCTCGTTTGGACCCTCCAATTCCTGCCACGTATTTTGGAAATTGTGTTGGAGGCCAAATGGTTGTGGCTGAGACAAAGGACTTAGTAGAAAATGATGGATTTATTACTACTTTGGAGGGGATAAATGAAGCCTTGATTAGAGTGAAGGATGGAGTGTTAAATGGAGCAAAAGATTTGGTTTCAAATATGCAAAAAGCAACCACGGACAGAATATTTTCTACTGCTGGATCACCATGGTTTGAGGTTTATAGTACTGATTTTGGATGGGGGAGGCCAAAGAAGGTGGATATGGCTTCAATAGACAGAACAGGAGCATTTTCTCTTTCTGAAAGTAGGAATAATGATGGAGGAATTGAGATTGGATTGGTGTTATGTAAACGGGAGATGGAAGCTTTCAGTACCCTATTTGTTCAAGGACTTGAATCCTTTTAA 1371 0.4026 MTQPSTPSFKVVQVCSVAPLQGPTLSTTPTSLPLTFFDLLWLRFPPVERLFFYSFPHSSSSFFDSVLPALKHSLSLTLQHFLPFAGNITWPHDSSIPIINYFPGDAVSFTVAESNANFTHLCSHLCEAEKRQPLIPHLNTSHEQASVLALQVTVFPNSGFCIGITTHHAAFDGKSSTLFMKSWAYACSNNLGESSSLSLPQHLTPFFDRSVIKDPEGISQAYVDAWMNHGGSNNRSLKVWESINATPSDAVKGLFELTPSHIEKLKQHANSKMKTKVKLSTFSVTCAYVLACLVKAEQPKTNRIVFIFSVDCRSRLDPPIPATYFGNCVGGQMVVAETKDLVENDGFITTLEGINEALIRVKDGVLNGAKDLVSNMQKATTDRIFSTAGSPWFEVYSTDFGWGRPKKVDMASIDRTGAFSLSESRNNDGGIEIGLVLCKREMEAFSTLFVQGLESF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0272 456 Gene3D - 246 456 IPR023213 -
Apr6g0272 456 PANTHER - 6 455 - -
Apr6g0272 456 SUPERFAMILY CoA-dependent acyltransferases 253 436 - -
Apr6g0272 456 Pfam Transferase family 23 446 - -
Apr6g0272 456 Gene3D - 9 237 IPR023213 -
Apr6g0272 456 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 6 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0272 Apr-Chr6 2791567 2793662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0272 23 451 Monolignol Biosynthesis Gene Families AT5G48930 26.802 4.66e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0272 - - gmx:100800849 605.52