Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0271 ATGGGTCCTTTTCCATGTCTATCATGCTTCACCACCCCAAAATCCAACACCAAAAACCACTTTATCCCTCTCGAACAACTATGTCACCGTTATTCTTGTGCTCAACTTCAAAAAGCCACAAACAACTTCAACCAAAGTTCAATTGTTAGTGGAGAAGGCCCATGTCAGGTCTACAAAGGCCACCTCAAAGCCCAAGGATATGTTGCAATCAAGAAGTTCAAGACTAGAAGCCCAGCTGGTGATACAGAATTCAGGGCTGAAGTTAAAATTCTTTGTCAACTACACCACCCAAATGTTGTTCCTTTGATTGGTTTTGGTGAGCATAAAAGTGACAAGTTCGTTGTGTATGATTATGTCTCTAATGGAAGCCTCTATGATTGTTTGCATGGTACCAACATTAACAATGTTGTTCCATTGTCATGGAAACAAAGACTAAACATTTGTATTGGTGTGGCTCGTGGACTACACTACATTCATTTTGGATCAAAGATACCCATCATTCACCGTGCAGTGAAATCAAGCAACATTCTTTTGGACCATAATTTGGTGCCTAAATTGGCAGATTTTGGGCTATGCAAGAAGGAACCTCAAGGGGATTCAAGGCCAAAACCACCAAGAGTTGAGGTGAGGGAGGATTTGGAAGTTAGTTTGGAATACATGGACCCAGAGTTTCATATGTATGGATGGCTATCAAAGAAGTGTGATGTGTATTCTTTTGGTGTGGTTTTGTTGGAGATTTTATGTAGGAAAGAAGCATGTTTTTTGACCCCTTATGGAGTTTATGTGTACCTTGTCAAGTGGGCCTTTAATGATGAAAGAAAAGGTGTTCCTGAGAAGATTGTTGATCCATGTCTCATGGGAAAAATAGCACCAGAGTGTTGGCAAGTGTTCATTGAGATCCTTCAGAGATGTTTGGCTTCAGATGGTGAAGAGAGACCAACAATGGGGGAAGTGGAAGTGGTTCTAGAGAATGCATTGCTTTTGCAGGAAAGAGCAGATGCTGAGAAGGAGCATCATGATCCCAGTTCTAATTATAGCTTGGCCAATTGCAACTAA 1056 0.411 MGPFPCLSCFTTPKSNTKNHFIPLEQLCHRYSCAQLQKATNNFNQSSIVSGEGPCQVYKGHLKAQGYVAIKKFKTRSPAGDTEFRAEVKILCQLHHPNVVPLIGFGEHKSDKFVVYDYVSNGSLYDCLHGTNINNVVPLSWKQRLNICIGVARGLHYIHFGSKIPIIHRAVKSSNILLDHNLVPKLADFGLCKKEPQGDSRPKPPRVEVREDLEVSLEYMDPEFHMYGWLSKKCDVYSFGVVLLEILCRKEACFLTPYGVYVYLVKWAFNDERKGVPEKIVDPCLMGKIAPECWQVFIEILQRCLASDGEERPTMGEVEVVLENALLLQERADAEKEHHDPSSNYSLANCN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0271 351 Pfam Protein tyrosine and serine/threonine kinase 56 319 IPR001245 GO:0004672|GO:0006468
Apr6g0271 351 ProSiteProfiles Protein kinase domain profile. 43 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0271 351 Gene3D Transferase(Phosphotransferase) domain 1 119 347 - -
Apr6g0271 351 SUPERFAMILY Protein kinase-like (PK-like) 18 318 IPR011009 -
Apr6g0271 351 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 25 346 - -
Apr6g0271 351 PANTHER OS07G0166700 PROTEIN 25 346 IPR045272 GO:0004714|GO:0006468
Apr6g0271 351 Gene3D Phosphorylase Kinase; domain 1 8 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0271 Apr-Chr6 2789018 2790073 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0271 8 330 Receptor kinase-like Gene Family AT4G39110 44.615 2.03e-76 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr6g0271 PK_Tyr_Ser-Thr 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0271 - - gmx:100800314 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0271 6 2789018 2790073 Apr4g2539 4 34238794 34241064 PCT