Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0261 ATGATCAATAGCACAAAAGAAGCAGATTTTTCACTAAAACAGGAAGGTGTTTCAAGTGATGAAAAGGCAAAGGCTTCATCAAGCACATCACAATGGCTAAAACTGAAGGATCCAAGGATTGTACGTGTATCTCGAGCCTTTGGAGGGAAAGATAGACATAGCAAAGTATGCACAATTAGAGGACTAAGAGATAGGAGGGTAAGGCTTTCAGTTCCCACTGCCATTCATCTCTATGACCTCCAAGATAGGCTAGGACTTAGTCAACCTAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCTAAACATGAAATTGATGAACTTCCTCCACTTCCAATACCCCCAGGTAACTTCACCCTTGGTTATCCATCTCTTGTTACTTGTAATGAAGTTAGCACCTCTAGAGAAGGTTCAGGCCAAAACACTATATGGAAATCAAAGTCCAAAGAAGTTTCCGGAGAAATGGTTAGTGATAAAGAAAATTGGATAAATAGAAGTGAAGAAGCCGATAACAATAAACATGGAAGCAATGATTGTCCTAGTGCACATGTTTTGCCAAATAATCTTAACCCAAGAGCAAATCATCCTTCTTTTTTGGGCTTATTGAACACTATGCCATTTGGTTACCAATGGGAGACGAATTCAGCTGATGTAGCTCAATTGGCAAACCATGGATTTGTAAACCAAACAGATATACACAGCATTAATGTGGTTCCATTCCCATCAACATTGGCTTTATCAACTGGGAGTACTACTTCACAAATTTTGGTGTGTCCTCCTGGATCAACACAACCATATTTCCCTTCACATGTTGCAGCAATGGAGATGAATCCAAGACAAATTAACCACAATCAGATGCTGAGTTCAAGTTGTCAAAACCCTTTGACCAATTCACTCGGTTCATCACAACACCTCATGAGCCAATCAGGGAAAGTACCATTCAACTTGGATCAAACAGGTAAAACTTAG 966 0.3996 MINSTKEADFSLKQEGVSSDEKAKASSSTSQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLVTCNEVSTSREGSGQNTIWKSKSKEVSGEMVSDKENWINRSEEADNNKHGSNDCPSAHVLPNNLNPRANHPSFLGLLNTMPFGYQWETNSADVAQLANHGFVNQTDIHSINVVPFPSTLALSTGSTTSQILVCPPGSTQPYFPSHVAAMEMNPRQINHNQMLSSSCQNPLTNSLGSSQHLMSQSGKVPFNLDQTGKT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0261 321 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Apr6g0261 321 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 315 IPR005333 GO:0003700
Apr6g0261 321 MobiDBLite consensus disorder prediction 288 321 - -
Apr6g0261 321 Pfam TCP family transcription factor 49 172 IPR017887 -
Apr6g0261 321 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 315 - -
Apr6g0261 321 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0261 Apr-Chr6 2698029 2700711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0261 32 285 TCP Transcription Factor Family AT3G02150 44.030 2.35e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr6g0261 TCP 1.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0261 - - aprc:113867214 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0261 6 2698029 2700711 Apr6g0261 6 2698029 2700711 ECH